Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., HDIG domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 18/163 (11%)

Query: 164 ALIHQLVDHVHQIETQ------SPEHWLHIKQHKERISRYARIIALDVADQYALDDELIE 217
           AL+  L+ H+ +++          E  + + QH   ++    ++A+ +     L    + 
Sbjct: 128 ALVEDLLSHLQEVQKPFLTLVGMDEKDVSVTQHGVSVA----VLAMMIGHALDLPARELR 183

Query: 218 NISQFATCHDLGKLALPADLLQKRASLANHEKEQVHNHIEYGIDLLNEVIAKLGTPHHPC 277
           +I+  +  HD+GKL +P  + +KR++L  HE   +  H  +G D+LN    + G      
Sbjct: 184 DIALGSLFHDIGKLKVPDVIRRKRSALTPHEANYLQMHPNFGYDMLN----RSGLFPKEV 239

Query: 278 LAVLREIMAYHHEFLDGSGYPFGLVSDQIPIPARIIAVANIFD 320
           L     I+ +HHEF+DGSG+P GL   +IP+  +I+++AN +D
Sbjct: 240 L----NIVLHHHEFVDGSGFPDGLTGHKIPMVTQIVSLANDYD 278