Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., HDIG domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 28/190 (14%)

Query: 153 SLIQQSICGEYALIHQLVDHVHQIETQSPEHWLHIKQHKERISRYARIIALDVADQYALD 212
           S+++Q +  +  ++H + D   Q E+        I  H   +S    I+++ +A +   D
Sbjct: 144 SMVEQLLTSDNLVLHLMSD-AKQDES--------IYYHSLNVS----ILSMLIAKEMEWD 190

Query: 213 DELIENISQFATCHDLGKLALPADLLQKRASLANHEKEQVHNHIEYGIDLLNEVIAKLGT 272
              IE +   A  HD+GKL +P  +L+K    +  E   +  H   GIDLL     KL  
Sbjct: 191 RSEIELVGLSALFHDVGKLKVPPQILKKTTPWSAPELNFIKQHPLLGIDLL-----KLAD 245

Query: 273 --PHHPCLAVLREIMAYHHEFLDGSGYPFGLVSDQIPIPARIIAVANIFDALTAHRPYKQ 330
             P     A++      HHEFLDGSGYP GL    +   ++++AV N +D+L    P  Q
Sbjct: 246 NFPEAALPAIIN-----HHEFLDGSGYPKGLKEADLDKISQLLAVVNEYDSLC--YPSNQ 298

Query: 331 AQS-IPHALL 339
            ++ +P+A L
Sbjct: 299 GKARMPYAAL 308