Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., HD domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 9/212 (4%)

Query: 127 VGFLFFNASMSHYFSASVVERLETYLSLIQQSICGEYALIHQLVDHVHQIETQSPEHWLH 186
           + FL  NA ++     +V   L    S +  ++    A +  L       + ++  H L 
Sbjct: 172 INFLVTNAMVT----LTVAYLLGKLSSSLYSTLASRQATVLGLAKLAEYRDNETGAHLLR 227

Query: 187 IKQHKERISRYARIIALDVADQYALDDELIENISQFATCHDLGKLALPADLLQKRASLAN 246
           ++Q+ + ++   R++A +   +  LD++ I++IS  A  HD+GK+ +   +L K   L  
Sbjct: 228 MRQYSKMLAAQ-RMLAENPPPE--LDEDFIQDISLSAILHDIGKVGIADAILLKPGRLTP 284

Query: 247 HEKEQVHNHIEYGIDLLNEVIAKLGTPHHPCLAVLREIMAYHHEFLDGSGYPFGLVSDQI 306
            E EQ+  H   G  +L  ++     P    + + R+I + HHE  DGSGYP GL  + I
Sbjct: 285 EEFEQIKAHPVIGGQVLASLLEY--APRCTFITMGRDIASGHHEKWDGSGYPLGLKEENI 342

Query: 307 PIPARIIAVANIFDALTAHRPYKQAQSIPHAL 338
           P+ ARI+A+ +++DALT+ R YK+  S   AL
Sbjct: 343 PLSARIVALVDVYDALTSPRCYKRPFSHEEAL 374