Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 15/181 (8%)

Query: 190 HKERISRYARIIALDVADQYALDDELIENISQFATCHDLGKLALPADLLQKRASLANHEK 249
           H  R+S YAR++A+ +     L     E +   +  HD+GK+  P  +L+K   L   E 
Sbjct: 166 HVVRMSHYARLLAIKLG----LPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEW 221

Query: 250 EQVHNHIEYGIDLLNEVIAKLGTPHHPCLAVLREIMAYHHEFLDGSGYPFGLVSDQIPIP 309
           + +  H   G +++ E          P L + R I   HHE  DG+GYP GL  + IPI 
Sbjct: 222 KIMQQHAVIGAEIIGE-------HGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIE 274

Query: 310 ARIIAVANIFDALTAHRPYKQAQSIPHALLELEKMVSDGKLDRHCVNALRENQEELKEIV 369
            RI+A+A++FDALT+ RPYKQ  +I  A +EL +  +    D   V    E ++ L E++
Sbjct: 275 GRIVAIADVFDALTSQRPYKQPWTI-EATMELLENQAGQHFDPKLV---EEFKQILPEVI 330

Query: 370 A 370
           A
Sbjct: 331 A 331