Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 26/201 (12%)

Query: 189 QHKERISRYARIIALDVADQYALDDELIENISQFATCHDLGKLALPADLLQKRASLANHE 248
           +H  R+ + +R++   +     L  +  + + + A  HD+GK+ +P ++L K   L + E
Sbjct: 170 RHVIRVGQISRLLGAAMG----LGTQQCDLLGECAPLHDVGKIGIPDEVLLKPGRLDDDE 225

Query: 249 KEQVHNHIEYGIDLLNEVIAKLGTPHHPC--------------LAVLREIMAYHHEFLDG 294
              +  H  YG ++L  +  +    H  C              LA+ R +   HHE  DG
Sbjct: 226 LVIMRRHCLYGCEILGPLDDREAA-HRICSDVPLLRDQQPFDELALARILALCHHERWDG 284

Query: 295 SGYPFGLVSDQIPIPARIIAVANIFDALTAHRPYKQAQSIPHALLELEKMVSDG---KLD 351
            GYPFGL  + IP+ ARI++V +++DAL + RPYK A     A +    ++ DG   + D
Sbjct: 285 GGYPFGLSGEDIPVEARIVSVVDVYDALCSDRPYKTAMPPDEAAI----LIRDGAGTQFD 340

Query: 352 RHCVNALRENQEELKEIVARF 372
              V+A   ++ E+  I  R+
Sbjct: 341 PAVVDAFLCHRTEIDAIRDRW 361