Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., Chromate transport protein ChrA from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (270), Expect = 3e-28
 Identities = 114/432 (26%), Positives = 185/432 (42%), Gaps = 67/432 (15%)

Query: 5   FRTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVGFAI 64
           F  +  LG++SFGGPA  I       VE+ RW+SE+ +   +     LPGP + Q+   +
Sbjct: 25  FWFWLKLGFISFGGPAGQISIMHQELVERRRWISERRFLHALNYCMLLPGPEAQQLATYL 84

Query: 65  GY--HR---GGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIV 119
           G+  HR   G +AGA      F LPS+ I++ L+ L     + P+   + +G+K     +
Sbjct: 85  GWLMHRSWGGIIAGAL-----FVLPSLFILITLSWLYVAFGEVPVVAGIFYGIKPAVTAI 139

Query: 120 VADACLTMYRNFCQQRLTAGLCVLTAVAITLAPGLITQFAVLLI-AAFVGQ--ARLAPQQ 176
           V  A    +R   +      L  + A + T        F ++++ AA +G    R  P++
Sbjct: 140 VVHAA---HRIGSRALKNNWLWAIAAASFTAIFAFNVPFPLIVLGAAVIGYLGGRWVPEK 196

Query: 177 SFST-------TTFSPSWLS------------------LLLFASLLLGLP--LLAA---- 205
            FS         +F P+ +                   L +  +LL  LP  LL A    
Sbjct: 197 -FSLGGHDDKHQSFGPALIDDDTPPPEHVRFSAFRLARLAIIGALLWTLPMGLLTAVFGW 255

Query: 206 SSPLVELFGHFFQAGSLVFGGGHVVLP-LLQNALGDS--LSTDQFLTGYAAAQAVPGPMF 262
              L ++   F +A  L FGG + VLP + Q A+G    L+  Q + G A  +  PGP+ 
Sbjct: 256 EGTLTQMAWFFTKAALLTFGGAYAVLPYVYQGAVGHFGWLTPTQMIDGLALGETTPGPLI 315

Query: 263 TLATYLGY-------VLTPEMP-VVGALIATLA---VFLPGFLLLLGVLKNWSALAQRPK 311
            +  ++G+       V  PE   + GA+ ATL     FLP FL +L       +     K
Sbjct: 316 MVVAFVGFVGGYVMQVFGPEQAFLAGAVAATLVTWFTFLPSFLFILAGGPLVESTHNTLK 375

Query: 312 VAGAMQGVNACVVGLLLAAL----YQPVWSSTVHAPLDWAALLVGFFLFKVLRLPLIGMV 367
               +  + A VVG++L       Y  +W +     LDW + ++       L    +G++
Sbjct: 376 FTAPLTAITAAVVGVILNLACFFGYHVLWPNGFAGALDWPSAIIAIAAAVALFRYKLGVI 435

Query: 368 GSTLLFGVLSGL 379
              +  G L+GL
Sbjct: 436 QVLIACG-LAGL 446