Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., probable chromate transport transmembrane protein from Synechococcus elongatus PCC 7942

 Score =  122 bits (305), Expect = 2e-32
 Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 12/368 (3%)

Query: 8   FFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVGFAIGYH 67
           F  LG + FGGP A +GY     VE+ +WVSE EY + + L+Q  PGP ++Q+ F +GY 
Sbjct: 23  FLKLGALGFGGPIALVGYMHRDLVEERQWVSEAEYQEGLTLAQVAPGPLAAQLSFYLGYV 82

Query: 68  RGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVADACLTM 127
             G  G+    L F LPS LI++ L    +        + + +G+    I ++A +   +
Sbjct: 83  HYGFLGSALVGLAFVLPSFLIVVALGWAYTLYGGLNWMQAVFYGVGAAVIGIIAISAYKL 142

Query: 128 YRNFCQQRLTAGLCVLTAVAITLAPGLITQFAVLLIAAFVGQARLAPQQSFSTTTFSPSW 187
            R             L   A T+         +L   A V   +  P+        + S+
Sbjct: 143 TRKTVGTSWLLWSIYLVNAATTIVTESERVELILGSGALVLLVKFPPKHWIKQNRLN-SF 201

Query: 188 LSLLLFASLLLGLPLLAASSPLVELFGHFFQAGSLVFGGGHVVLPLLQNALGDS---LST 244
           + L L   L   +P  A +S L ++   F QAG+ VFG G  ++P L   +      L++
Sbjct: 202 IGLPLI-PLFAAVP-TATTSLLGQIALFFTQAGAFVFGSGLAIVPFLYGGVVKDFGWLNS 259

Query: 245 DQFLTGYAAAQAVPGPMFTLATYLGYVLTPEMPVVGALIATLAVFLPGFLLLLGVLKNWS 304
            QFL   A A   PGP+     ++G+++       GA +A +A+F+P +LL +     + 
Sbjct: 260 QQFLDAVAVAMITPGPVVITTGFIGFLVA---GFPGACVAAIAMFIPCYLLTVIPAPYFK 316

Query: 305 ALAQRPKVAGAMQGVNACVVGLLLAALYQPVWSSTVHAP---LDWAALLVGFFLFKVLRL 361
              + PK++  + GV     G +  A+      S    P   +   AL+  + L K L  
Sbjct: 317 KHGKNPKISTFVNGVTVAATGAIAGAVVVLGRQSLHDLPTFLIGLIALISSWKLGKKLPE 376

Query: 362 PLIGMVGS 369
           PLI ++ +
Sbjct: 377 PLIIVIAA 384