Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Chromate transporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  265 bits (677), Expect = 2e-75
 Identities = 171/380 (45%), Positives = 215/380 (56%), Gaps = 20/380 (5%)

Query: 2   LTIFRTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVG 61
           L +F  F  LG  +FGGP AH+GYF   FV +  W+ E  +A+ +AL Q LPGP SSQ+G
Sbjct: 21  LGVFGAFLTLGLTAFGGPIAHVGYFHRAFVVRRGWLDEAAFAERLALCQLLPGPTSSQLG 80

Query: 62  FAIGYHRGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVA 121
            AIG  R G AG  AAFLGFTLPS L+M  LA L+   LD PL   +I GL L A+ VVA
Sbjct: 81  VAIGLRRAGAAGGLAAFLGFTLPSALLMAALA-LTLARLDGPLAGGLIAGLTLAAVAVVA 139

Query: 122 DACLTMYRNFCQQRLTAGLCVLTAVAITLAP--GLIT---QFAVLLIAAFVGQARLAPQQ 176
           DA L M R  C  R  A L +LT   +   P  G +    Q   L +AA +G A+    +
Sbjct: 140 DAVLGMARQLCPDRRRASLALLTLACVLAWPNDGPLAPWGQMMPLAVAAALGAAQGWRHR 199

Query: 177 SFSTTTFS-----PSW---LSLLLFASL-LLGLPLLA--ASSPLVELFGHFFQAGSLVFG 225
               T  +     P W   +  L  A L   GLPLLA  A +PL  L    FQ G+LVFG
Sbjct: 200 DRQATPGARVRGFPGWRWGIGFLGLAGLGFFGLPLLAALAPTPLTTLAAALFQTGALVFG 259

Query: 226 GGHVVLPLLQNALGDSLSTDQFL--TGYAAAQAVPGPMFTLATYLGYVLTPEMPVVG-AL 282
           GGHVVLPLLQ  L +    D  +  TGY  AQA+PGP+FT+A YLG  + P    VG A 
Sbjct: 260 GGHVVLPLLQGTLVEGALIDGAILTTGYGLAQAMPGPLFTIAAYLGAAIAPPGAAVGYAG 319

Query: 283 IATLAVFLPGFLLLLGVLKNWSALAQRPKVAGAMQGVNACVVGLLLAALYQPVWSSTVHA 342
           +A LA+FLPGFLLL   L  W+AL + P + GA++ VNA VVGLL AAL+  + ++ V  
Sbjct: 320 VAILAIFLPGFLLLAACLPFWAALRRNPLLTGAIEAVNAAVVGLLAAALWDLLIATAVRG 379

Query: 343 PLDWAALLVGFFLFKVLRLP 362
               A  ++ F   +  R P
Sbjct: 380 GTAAALAVLTFLALRFWRAP 399