Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., chromate transporter (RefSeq) from Shewanella loihica PV-4

 Score =  348 bits (894), Expect = e-100
 Identities = 195/400 (48%), Positives = 259/400 (64%), Gaps = 26/400 (6%)

Query: 4   IFRTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVGFA 63
           +F+ F  LG +SFGGPAAHIGYF+  FV+ L W+  + +   VA+SQ +PGPGSSQVGFA
Sbjct: 4   VFKQFLLLGLMSFGGPAAHIGYFKRRFVDDLGWLDAERFGAIVAMSQVIPGPGSSQVGFA 63

Query: 64  IGYHRGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVADA 123
           IG+H+ GL GA AAFLGFTLPS L++ L+A  S   LDT  F+ +IHGLKL+A++VVADA
Sbjct: 64  IGHHKAGLPGALAAFLGFTLPSFLLLYLMAVASLSWLDTSWFQGLIHGLKLMAVVVVADA 123

Query: 124 CLTMYRNFCQQRLTAGLCVLTAVAITLAPGLITQFAVLLIAAFVGQARLAPQ-------- 175
            L+M++ FC++  T  L +L A        L +Q  +L++AA +G   LAP         
Sbjct: 124 VLSMFKQFCRRGATRILMLLCASLTLFVGTLASQLGLLILAAVIGAVCLAPSALRGIDQD 183

Query: 176 ---------QSFSTTTFSPSWLSLLLFASLLLGLPL--LAASSPLVELFGHFFQAGSLVF 224
                    +  +  T  P  L L+LF  LL GL L  L     L +LF  F+QAG+LVF
Sbjct: 184 AGRQGAKGGEGGAVDTLRPQMLPLMLFI-LLFGLSLFWLGTGHSLSQLFAQFYQAGALVF 242

Query: 225 GGGHVVLPLLQNALGDSLSTDQFLTGYAAAQAVPGPMFTLATYLGYVLTPEMPVVGALIA 284
           GGGHVVLPLL+ ++G  L++++FLTGYA AQAVPGPMFTLA +LG     E P++GAL+A
Sbjct: 243 GGGHVVLPLLEASVGQQLTSERFLTGYALAQAVPGPMFTLAAFLGAESWLESPLLGALVA 302

Query: 285 TLAVFLPGFLLLLGVLKNWSALAQRPKVAGAMQGVNACVVGLLLAALYQPVWSSTVHAPL 344
           TLA+FLPGFLL L +L++W  L  R +  GA+ G+NA VVGLLLAAL  PV +S + A  
Sbjct: 303 TLAIFLPGFLLQLSLLRSWHGLMGRARFRGAIMGINAAVVGLLLAALISPVIASAILAWP 362

Query: 345 DWAALLVGF-----FLFKVLRLPLIGMVGSTLLFGVLSGL 379
           D   +L+G      +   +L L L+G   + +L GVL GL
Sbjct: 363 DALLVLIGLAWQLRYRPSILML-LLGFALTGILLGVLGGL 401