Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., chromate transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  381 bits (978), Expect = e-110
 Identities = 207/382 (54%), Positives = 267/382 (69%), Gaps = 4/382 (1%)

Query: 1   MLTIFRTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQV 60
           ML IF  FF LG +SFGGPAAHIGYFR TFV +L W+ ++ Y+  VALSQF+PGPGSSQV
Sbjct: 8   MLQIFLRFFTLGLMSFGGPAAHIGYFRQTFVNELGWLDDKRYSSLVALSQFMPGPGSSQV 67

Query: 61  GFAIGYHRGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVV 120
           GFAIGYHRGGL GA AAF GFTLPS ++M LLA  ++  L     + ++HGLKLLA++VV
Sbjct: 68  GFAIGYHRGGLLGAIAAFAGFTLPSFVLMYLLAVTTAAWLGNEYMQGIVHGLKLLAVVVV 127

Query: 121 ADACLTMYRNFCQQRLTAGLCVLTAVAITLAPGLITQFAVLLIAAFVGQARLAPQQS--F 178
           ADA L M++ FCQ++ +  L + +A AI + P L TQ  +L+IAA +G + L+  +S   
Sbjct: 128 ADAVLAMFKQFCQRQTSRLLMLGSAAAILILPFLWTQIVLLIIAAILGLSFLSVTESEPN 187

Query: 179 STTTFSPSWLSLLLFASLLLGLPLLAASSPLVELFGHFFQAGSLVFGGGHVVLPLLQNAL 238
                  ++LSL LF  L +             LFG FF+ GSLVFGGGHVVLPLL+ A+
Sbjct: 188 KPEPIRLNYLSLGLFMVLFVASFFSLHFGVEAGLFGEFFRVGSLVFGGGHVVLPLLETAV 247

Query: 239 GDSLSTDQFLTGYAAAQAVPGPMFTLATYLGYVLTPEMPVVGALIATLAVFLPGFLLLLG 298
           GDS+S D+FLTGYA AQAVPGPMFT AT+LG  +  E P +GA IAT+A+FLPGFLL+L 
Sbjct: 248 GDSMSGDRFLTGYAFAQAVPGPMFTFATFLGAEMMLENPFIGAAIATVAIFLPGFLLMLV 307

Query: 299 VLKNWSALAQRPKVAGAMQGVNACVVGLLLAALYQPVWSSTVHAPLDWAALLVGFFLFKV 358
            L++W A+A RPK+AG + GVNACVVGLL AALYQPV+S  V + +D A +L+GF   K 
Sbjct: 308 GLRSWHAIAARPKMAGMLAGVNACVVGLLAAALYQPVFSQGVLSAVDMAIVLIGFGALKF 367

Query: 359 LRLPLIGMVGSTLLFGVLSGLI 380
            +  ++ +V    + G+  GLI
Sbjct: 368 FKPQMLLLVLGFSVCGI--GLI 387