Pairwise Alignments

Query, 1024 a.a., beta-galactosidase from Vibrio cholerae E7946 ATCC 55056

Subject, 1103 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  562 bits (1449), Expect = e-164
 Identities = 369/1095 (33%), Positives = 533/1095 (48%), Gaps = 142/1095 (12%)

Query: 13   WQNPHIVKWHCRTPHVPLHSYRTEQEA---RLDVGGNRQSLNGQWRFALFEKPEAVEPAV 69
            WQ+  +V  +   P     +Y    +A   + +     Q LNG W+F   +  + +   +
Sbjct: 11   WQDVQVVSVNKEYPRTSFMTYDNRTDALTGKFEKSNYYQLLNGTWKFFFADSYKDLPANI 70

Query: 70   IDPDFDDSAWAHIPVPSNWQMQGFDKPIYTNIQYPFADR---PPYVPQDNPTGCYRHRFT 126
             DP     +W  I VP NW++QG+   IYTN  Y F  R   PP +P+ NP G YR    
Sbjct: 71   TDPSVSTDSWNDIKVPGNWEVQGYGVAIYTNHGYEFKPRNPQPPSLPEANPVGVYRRDID 130

Query: 127  LEKQALTESIRIVFDGVNSAFHLWCNGHWVGYSQDSRLPAEFELTPYLQEGENLLVAMVL 186
            +        I +   G  S  +++ NG  VGYS+DS+ PAEF +  Y++ G+N+L   + 
Sbjct: 131  IPADWKERDIYLHLAGAKSGVYVYINGQEVGYSEDSKNPAEFLINKYVKPGKNVLTLKIF 190

Query: 187  RWSDGSYLEDQDMWWLSGIFRDVYLYRKPILAIEDFFIRTELDALYQHAELRVETRLSQV 246
            RWS GSYLE QD W +SGI RDVYLY +P  A++DF I + LD  Y++    +   L   
Sbjct: 191  RWSTGSYLECQDFWRISGIERDVYLYSQPKAALKDFRITSTLDDSYKNGVFALNVDL--- 247

Query: 247  TRHHQ-------VQVALFDAQGECVARSQALHTGQRVVDEKGAWHDKTEHSLAICSPTLW 299
             R+H+       +   L DAQG+ VA  +   T   V + +    DK      +     W
Sbjct: 248  -RNHRPAATNLTLAYELLDAQGKVVATEEKT-TYVPVNETRTLSFDKN-----LTDVHTW 300

Query: 300  SDEAPYLYRCVICLLDEDGAPIEFESAAVGFRKVEITQ-----------GLLKLNGQPLL 348
            + E P LY+ V+ +  E+G   E     VGFR++EI               L +NGQPL 
Sbjct: 301  TSEHPNLYKLVMTV-KEEGKVNEIIPFNVGFRRIEIKPIDQKAANGKPYVCLFINGQPLK 359

Query: 349  IRGVNRHEHHPELGHVMDEASMRRDIELMKQHNFNAVRTAHYPNHPRWYELCDEYGLYVV 408
            ++GVN HEH+PE GH + E  MRRD ELMKQHN N+VR  HYP   R+YELCDEYGLYV 
Sbjct: 360  LKGVNIHEHNPETGHYVTEELMRRDFELMKQHNLNSVRLCHYPQDRRFYELCDEYGLYVY 419

Query: 409  DEANLETHGQFPMSR----LSNDPQWVNAYLQRMIGMVERDKNHPCVIIWSLGNESGIGT 464
            DEAN+E+HG +   R    L N+P+W+  ++ R I M ER+KN+P V  WSLGNE+G G 
Sbjct: 420  DEANIESHGMYYDLRKGGSLGNNPEWLKPHMDRTINMFERNKNYPSVTFWSLGNEAGNGY 479

Query: 465  NHHAMYQWTKQRDPS---RPVQYEGGGANTAATDIVCPMYARVDQHQPHPAVPKYALKNW 521
            N +  Y W K+ D +   RPV YE      A  +    MY           VP+Y    W
Sbjct: 480  NFYQTYLWLKEADKNIMQRPVNYE-----RAQWEWNTDMY-----------VPQYPGAGW 523

Query: 522  ISLPQEN---RPLILCEYAHAMGNSLGAFYKYWQAFREFPRLQGGFIWDWVDQGISKWDS 578
            +    +N   RP++  EYAHAMGNS G  +  WQA  ++P LQGG+IWDWVDQG+ + D 
Sbjct: 524  LEDIGKNGSDRPIVPSEYAHAMGNSTGNLWGQWQAIYKYPNLQGGYIWDWVDQGLLQKDK 583

Query: 579  EGRHYWGYGGDFG-DTINDRQFCINGLLFPDRTPHPALHEVKKVQQPYQF---SLSYPKL 634
             GR YW YGGDFG +  +D  F  NGL+ PDR  HPA+ EVK V Q   F     +  K 
Sbjct: 584  NGREYWAYGGDFGVNAPSDGNFLCNGLVNPDRGLHPAMAEVKYVHQNVGFDAIDAASGKF 643

Query: 635  TIHNERLFAAL-PLELVVSVLCDGQEIKQERLPLDIAPRGT--ITLDLASLPMLPEHEYH 691
             I N   F  L   ++  SVL +G+ +K  ++ LDIAP+ +   T+ +  L   P  EY 
Sbjct: 644  NITNRFYFTNLKKYQIHYSVLANGKTVKSGKVSLDIAPQASKEFTVPVNGLKARPGTEYF 703

Query: 692  LNAVLLCREDQPWSNAGHCIASEQWCLQPRRSMLPKITHAPLPQWQQDGDKVRIEAANQQ 751
            +N  ++  E +P   AG+ IA +Q+ L           + P  Q Q  GD++ + ++   
Sbjct: 704  VNFSVIAVEPEPLIPAGYEIAYDQFRLPVEAERNTYKANGPALQTQTQGDELTVSSSKVN 763

Query: 752  WQFNRQTGLLEQWWQNGQPVLSE--PLRDNFYRAVLDNDIGTSEAQHLDPNSWIARWHAA 809
            + FN+++GL+  +  +G     +   ++ NF+RA  DND G    + L        W  +
Sbjct: 764  FVFNKKSGLVTSYKVDGTEYFKDGFGIQPNFWRAPNDNDYGNGAPKRLHV------WKQS 817

Query: 810  GLDKLRVECDDLRVTTLNESVEV------------VIDVAHYHQQALALRTRWRYQIFGD 857
              D       D +V+T +++V +            V+    Y    + +  ++       
Sbjct: 818  SKD---FHVTDTKVSTEDKAVLLQATYLLAAGNLYVVTYKIYPSGIVHVNAKFTSTDMQA 874

Query: 858  ARVELNVEVMLCSDLP------------PLPRVGLTLALPVAENPVSWFGRGPHENYPDR 905
            A  E++    + +  P             +PR+G+   LP   N V +FGRGP ENY DR
Sbjct: 875  AETEVSEATRMATFTPGSDAARKAASKLEVPRIGVRFRLPAQMNNVQYFGRGPEENYIDR 934

Query: 906  LQSAHVGRYTATVDELHTPYIFPSENGLRCDTRQLQVG-------ALVVEGHFHFSLSRY 958
                 VG Y  T D+++  Y+ P ENG   DTR L +         +V +    F+  R 
Sbjct: 935  NHGTMVGIYQTTADKMYFNYVRPQENGHHTDTRWLNLSPDKGNGLVIVADSLIGFNALRN 994

Query: 959  S--------------------------------QTMLDKAKHSNELVAGDKWYLNLDAQH 986
            S                                + +L +  H N++   D   + +D + 
Sbjct: 995  SVEDFDSEEALPHPYQWNNFSPEEAANHDEKAARNVLRRMHHVNDVTPRDFVEVCVDMKQ 1054

Query: 987  MGVGGDDSWSQSVHP 1001
             GVGG DSW     P
Sbjct: 1055 QGVGGYDSWGARPEP 1069