Pairwise Alignments

Query, 1024 a.a., beta-galactosidase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., beta-glucuronidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 89.0 bits (219), Expect = 9e-22
 Identities = 104/477 (21%), Positives = 192/477 (40%), Gaps = 62/477 (12%)

Query: 56  FALFEKPEAVEPAVIDPDFDDSAWAHIPVPSNWQMQ----GFDKPIYTNIQYPFADRPPY 111
           FA     +   P    P F+ + W ++     ++      G  + + T  +       P+
Sbjct: 15  FAANATNDIPRPEYPRPQFERTTWVNLNGTWTYEFDLDDSGKKRNLPTAKELSKTITVPF 74

Query: 112 VPQDNPTGC----------YRHRFTLEKQALTESIRIVFDGVNSAFHLWCNGHWVGYSQD 161
            P+   +G           Y+    +      + I + F  V+    ++ +G  VG+   
Sbjct: 75  CPESKLSGVNHTDFIKKMWYQRSLPIPADWSNKKILLHFGAVDYLAEIYIDGRLVGFHNG 134

Query: 162 SRLPAEFELTPYLQEGE--NLLV-----AMVLRWSDGSYLEDQDMWW-----LSGIFRDV 209
              P   +++   + G   NL+V     A   R + G    +++ +      ++GI++ V
Sbjct: 135 GSSPFVIDISRIAKPGNSHNLVVSVSDDAKSGRQACGKQSPEKNSFACFYTRVTGIWQTV 194

Query: 210 YLYRKPILAIEDFFIRTELDALYQHAELRVETRLSQVTRHHQVQVALFDAQGECVARSQA 269
           ++       ++      ++D    + +L +     Q++    ++V ++D+Q +    +  
Sbjct: 195 WMEALSPCGLKSANTYPDID----NNQLIITPEFYQISNDQTLEVTIYDSQKKVAQVTSK 250

Query: 270 LHTGQRVVDEKGAWHDKTEHSLAICSPTLWSDEAPYLYRCVICLLDEDGAPIEFESAAVG 329
              G  ++             L I +  LWS E P+LY    C+ D  G  I+   + VG
Sbjct: 251 CANGSNLI-------------LPIKNIKLWSPETPHLYDISYCVKDAKGQIIDEVKSYVG 297

Query: 330 FRKVEITQGLLKLNGQPLLIRGVNRHEHHPE-LGHVMDEASMRRDIELMKQHNFNAVRTA 388
            RKV I  G   LN +P   R V    ++P+ +     + +++ DI L K+  FN  R  
Sbjct: 298 MRKVHIANGKFYLNNEPYFQRLVMNQGYYPDGIWTAPTDEALKNDILLSKEAGFNGARL- 356

Query: 389 HYPNHPRWYELCDEYGLYVVDEANLETHGQFPMSRLSNDPQWVNA-YLQRMIGMVERDKN 447
               H +++E   E   Y  D+    T G+ P   ++ D +  +   L   I ++ERD+N
Sbjct: 357 ----HQKFFE---ERFHYWADKLGFITWGESPNWGMNPDDEVASRNLLSEWIEILERDRN 409

Query: 448 HPCVIIWS-----LGNESGIGTNHHAMY---QWTKQRDPSRPVQYEGGGANTAATDI 496
           HP +I W+     L N S  GT    ++   + TK  DPSRP     G      TDI
Sbjct: 410 HPSIITWAPLTVPLSNVSS-GTFARLVFDLQKLTKAIDPSRPFNDLTGSGFHFLTDI 465