Pairwise Alignments

Query, 1024 a.a., beta-galactosidase from Vibrio cholerae E7946 ATCC 55056

Subject, 1024 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  523 bits (1346), Expect = e-152
 Identities = 341/1021 (33%), Positives = 495/1021 (48%), Gaps = 99/1021 (9%)

Query: 12  DWQNPHIVKWHCRTPHVPLHSYRTEQEAR---LDVGGNRQSLNGQWRFALFEKPEAVEPA 68
           +WQ+ + V  +   PH  +  Y    E      +      SLNGQW+F   + P+     
Sbjct: 32  EWQSQYAVGLNKLDPHTYVWPYADASEVEKGTFEQSPYYMSLNGQWKFHWVKNPDTRPKD 91

Query: 69  VIDPDFDDSAWAHIPVPSNWQMQGFDKPIYTNIQYPFADR-------PPYVP-QDNPTGC 120
              P +    WA I VP NW+ QG+   IY N  Y F D+       PP VP ++N  G 
Sbjct: 92  FYKPSYYTGGWADIKVPGNWERQGYGTAIYVNETYEFDDKMFNFKKNPPLVPYKENEVGS 151

Query: 121 YRHRFTLEKQALTESIRIVFDGVNSAFHLWCNGHWVGYSQDSRLPAEFELTPYLQEGENL 180
           YR  F +        + +  +GV S +++W NG ++GY+Q S+  AE+++T  L +GEN 
Sbjct: 152 YRRTFKVPAGWEGRRVVLCCEGVISFYYVWVNGEFLGYNQGSKTAAEWDITDKLTDGENT 211

Query: 181 LVAMVLRWSDGSYLEDQDMWWLSGIFRDVYLYRKPILAIEDFFIRTELD-ALYQHAELRV 239
           +   V RWS G+YLE QDMW LSGI RDVYLY  P   I D+ + + L+   Y+     +
Sbjct: 212 IALEVYRWSSGAYLECQDMWRLSGIERDVYLYSTPEQYIADYKVTSLLEKEHYKEGIFEL 271

Query: 240 ETRL-SQVTRHHQVQVALFDAQGECVARSQALHTGQRVVDEKGAWHDKTEHSLAICSPTL 298
           E  +    +    +   L DA  + V        G R ++  G+ +        +     
Sbjct: 272 EVAVGGTASGTSSIAYTLKDASDKTVLE------GSRKLESHGSGNLIVFDEQRLPDVRR 325

Query: 299 WSDEAPYLYRCVICLLDEDGAPIEFESAAVGFRKVEITQGLLKLNGQPLLIRGVNRHEHH 358
           W+ E P LY  ++ L D  G   E     VGFR  EI  G   +NG P+L++GVNRHE H
Sbjct: 326 WNAEHPELYTLLLELKDAGGKVTEITGTKVGFRTSEIKNGRFCINGVPVLVKGVNRHE-H 384

Query: 359 PELGHVMDEASMRRDIELMKQHNFNAVRTAHYPNHPRWYELCDEYGLYVVDEANLETHGQ 418
            +LG  + +  M +DI LMKQHN N VR +HYP HP WY+LCD YGLYV+DEAN+E+HG 
Sbjct: 385 SQLGRTVSKELMEQDIRLMKQHNINTVRNSHYPAHPYWYQLCDRYGLYVIDEANIESHGM 444

Query: 419 -FPMSRLSNDPQWVNAYLQRMIGMVERDKNHPCVIIWSLGNESGIGTNHHAMYQWTKQRD 477
            +  + L+ D  W+ A++ R   M ER KNHP V+IWSLGNE+G G N    Y W K  +
Sbjct: 445 GYGPASLAKDSTWLPAHIDRTRRMYERSKNHPSVVIWSLGNEAGNGINFERTYDWLKSVE 504

Query: 478 PSRPVQYEGGGANTAATDIVCPMYARVDQHQPHPAVPKYALKNWISLPQENRPLILCEYA 537
            +RPVQYE    N   TDI C MY  VD            ++N+++     RP ILCEY 
Sbjct: 505 KNRPVQYERAEEN-YNTDIYCRMYRSVD-----------VIRNYVARKDIYRPFILCEYL 552

Query: 538 HAMGNSLGAFYKYWQAFREFPRLQGGFIWDWVDQGISKWDSEGRHYWGYGGDFG--DTIN 595
           HAMGNS G   +YW+ F   P  QGG IWDWVDQ   + D +G+ YW YGGD+G  D  +
Sbjct: 553 HAMGNSCGGMKEYWEVFENEPMAQGGCIWDWVDQSFREVDKDGKWYWTYGGDYGPKDVPS 612

Query: 596 DRQFCINGLLFPDRTPHPALHEVKKVQQPYQFSLSYPK-LTIHNERLFAALPLELVV--- 651
              FC NGL+   R PHP L EVKK+ Q  + +L   K LT+  +  F    L   +   
Sbjct: 613 FGNFCCNGLVNAVREPHPHLLEVKKIYQNIKSTLIDKKNLTVRVKNWFDFSDLNEYILHW 672

Query: 652 -SVLCDGQEIKQERLPLDIAPRGTITLDLASLPMLPE--HEYHLNAVLLCREDQPWSNAG 708
                DG  + +    +   P  T+ L L ++  LP+   E +L+     ++  P  +  
Sbjct: 673 KVTGDDGTVLAEGNKEVACEPHATVELTLGAV-QLPKTIREAYLDLGWTRKKSTPLVDTA 731

Query: 709 HCIASEQWCLQPRRSMLPKITHAPLPQWQQDGDKVRIEAANQQWQFNRQTGLLEQWWQNG 768
             IA +Q+ L     +           W         EA    ++ +  TG L+    +G
Sbjct: 732 WEIAYDQFVLPASGKV-----------WNGKPS----EAGKTTFEVDENTGALKSLCLDG 776

Query: 769 QPVLSEPLRDNFYRAVLDNDIGTSEAQHLDPNSWIARWHAAGLDKLRVECDDLRVTTLNE 828
           + +L+ P+  + +R   DND        L        W  AGL  L  +   L+ +  + 
Sbjct: 777 EELLASPVTISLFRPATDNDNRDRMGAKL--------WRKAGLHTLTQKVVSLKESKTSA 828

Query: 829 SVEV-VIDVAHYHQQALALRTRWRYQIFGDARVE--------LNVEVMLCSD---LPPLP 876
           + +V +++V                +  GDA +E        L V+     D   +  + 
Sbjct: 829 TAQVNILNVTG--------------KKVGDATLEYTLNHNGSLKVQTTFQPDTTWVKSIA 874

Query: 877 RVGLTLALPVAENPVSWFGRGPHENYPDRLQSAHVGRYTATVDELHTPYIFPSENGLRCD 936
           R+GLT  +      V++ GRG HE Y DR QS  +G YT T +++   Y+ P   G R D
Sbjct: 875 RLGLTFEMNDTYGNVTYLGRGEHETYIDRNQSGKIGIYTTTPEKMFHYYVIPQSTGNRTD 934

Query: 937 TRQLQVGA-------LVVEGHFHFSLSRYSQTMLDKAKHSNELVAGDKWYLNLDAQHMGV 989
            R +++         +  +  F FS   +S  +L+KA H N+L    +  ++LDA+  GV
Sbjct: 935 VRWVKLADDSGKGCWIESDSPFQFSALPFSDLLLEKALHINDLERNGRITVHLDAKQAGV 994

Query: 990 G 990
           G
Sbjct: 995 G 995