Pairwise Alignments

Query, 1024 a.a., beta-galactosidase from Vibrio cholerae E7946 ATCC 55056

Subject, 882 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  115 bits (288), Expect = 1e-29
 Identities = 111/439 (25%), Positives = 187/439 (42%), Gaps = 63/439 (14%)

Query: 42  DVGGNRQSLNGQWRFALFEKPEAVEPAVIDPDFDDSAWAHIPVPSNWQMQGFDKPIYTNI 101
           D G    + N  WRF  F+       AV   +FDD +W  +  P   ++   +     N 
Sbjct: 40  DCGRQVYNFNPGWRF--FKGDIRGAEAV---NFDDRSWEVVSTPHTVELMPAEGSGCRNY 94

Query: 102 QYPFADRPPYVPQDNPTGCYRHRFTLEKQALTESIRIVFDGVNSAFHLWCNGHWVGYSQD 161
           Q P                YR  F +      + + + F+       L+ NG  V     
Sbjct: 95  QGP--------------AWYRKHFVVPTATKGQRVLLHFEAAMGKQVLYLNGKRVQEHLG 140

Query: 162 SRLPAEFELTPY-LQEGENLLVAMVLRWS-DGSYLEDQDMWWLS-----GIFRDVYLYRK 214
             LP   +LT   +Q G++ L+A+    S D SY   +  + L      GI+RDV++  K
Sbjct: 141 GYLPFTLDLTANGVQAGDSCLLAVYTDNSNDKSYPPGKPQYTLDFAYHGGIYRDVWMIAK 200

Query: 215 PILAIEDFF---------IRTELDALYQH-AELRVETRLSQVTRHHQ---VQVALFDAQG 261
             +AI D           +    D + +  A++ VET +       +   ++  L DA+G
Sbjct: 201 SPVAITDAIDSRTVGGGGVFVHFDKISEKSAQVYVETEIQNDNTRSESVTIETTLTDAEG 260

Query: 262 ECVARSQ---ALHTGQRVVDEKGAWHDKTEHSLAICSPTLWSDEAPYLYRCVICLLDEDG 318
             + R+    +L++G++               + + +P LWS +APYLYR V   + +  
Sbjct: 261 NVIKRTSGKLSLNSGEK---------KSIRQQMEVRNPKLWSPDAPYLYR-VQSRIKKGN 310

Query: 319 APIEFESAAVGFRKVEIT--QGLLKLNGQPL-LIRGVNRHEHHPELGHVMDEASMRRDIE 375
             I+  +  +G R  E    +G   LNG+P   + G NRH+    +G+ +  +   RD +
Sbjct: 311 RSIDGGTTRIGIRLAEFRGKEGFW-LNGKPFGQLVGANRHQDFAYVGNALPNSQQWRDAK 369

Query: 376 LMKQHNFNAVRTAHYPNHPRWYELCDEYGLYVVDEANLETHGQFPMSRLSNDPQWVNAYL 435
            ++      +R AHYP  P + + CDE GL+V+    + T G       + DP++     
Sbjct: 370 RLRDAGCTIIRVAHYPQDPSFMDACDELGLFVI----VATPG---WQYWNKDPKFGELVH 422

Query: 436 QRMIGMVERDKNHPCVIIW 454
           Q    M+ RD+NHP V++W
Sbjct: 423 QNTREMIRRDRNHPSVLMW 441