Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Transcriptional regulator, LacI family from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (390), Expect = 2e-42
 Identities = 104/332 (31%), Positives = 163/332 (49%), Gaps = 5/332 (1%)

Query: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60
           ++ I++VAR AGVSVATVSR +    +    + D V +A+ + GYRPN  A    ++ T 
Sbjct: 1   LSNIREVARLAGVSVATVSRTLKSPERVLPETRDKVNAAVEQAGYRPNLMAVQFRSRRTG 60

Query: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120
            + +LV  +++ FF  ++      A   G  LL+ +   RA+ ER    L+   + D ++
Sbjct: 61  NLVILVPAIANTFFARVISGAQQAAQAAGYRLLLCDTRGRAQIEREFAALVYAHQADGVI 120

Query: 121 IHSKALPNEELIEYANEVKTLVLIN--RHIPQLADRCISLDNQKGAYLATDFLIRQGHRN 178
               + P E +      V++L L+N    +       ISLDN+  A   T+ LI  GHR 
Sbjct: 121 QLRASDPFESM---PAGVESLPLVNACEVVKNAPYPTISLDNRAAAQAMTEHLIGLGHRR 177

Query: 179 IACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPF 238
           I  I           R+AGYQ AL++ GI +  S I       + G+     +L  +   
Sbjct: 178 IGIIKGPRSSPLTLDRVAGYQDALSQAGIAVDPSLICHGDFTLKAGDDGAGAMLALADRP 237

Query: 239 TAVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEK 298
           +A+   ND MA GAL  +++ G  VPE +S++GFDD   + Y  P LTT+  P ++  EK
Sbjct: 238 SALFCENDEMAIGALRRIKQMGLRVPEDISLVGFDDIPFAAYCDPPLTTISQPAEIFGEK 297

Query: 299 ATQLALALATDAPRENDPMIFSPTIVRRDSVA 330
           A Q+ +AL    P     ++    +  R S A
Sbjct: 298 AVQMLIALIEKKPIAERHVVLPFELTVRGSTA 329