Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  185 bits (469), Expect = 2e-51
 Identities = 116/332 (34%), Positives = 187/332 (56%), Gaps = 4/332 (1%)

Query: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60
           MATIKDVA  AG+S  TVS V+N +   S+     V +A+ +L Y P+A AR+L  ++T+
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTS 60

Query: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120
           TIG+L+ +  +P+F  L + ++    R G  +++ N     E++R  L +L+  R D L+
Sbjct: 61  TIGLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLI 120

Query: 121 IHSKALPNEELIEYANEVKT-LVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRNI 179
           + S    +  +     EV+T LV+++R +  +    + +D+++GAYLAT  L+  GHR I
Sbjct: 121 VSSVG-GDAGIAGGLAEVRTPLVIVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHRAI 179

Query: 180 ACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPFT 239
           ACI        A+ R+AGY++AL +  + + + +   +   S  G +A   LL    P T
Sbjct: 180 ACIGGPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEFTSSAGHEAACQLLAAHPP-T 238

Query: 240 AVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEKA 299
           A+ A ND +A G L    E    VP+ +SVIGFDD  +SRY+ P LTTV   I  + E A
Sbjct: 239 AIFAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGETA 298

Query: 300 TQLALA-LATDAPRENDPMIFSPTIVRRDSVA 330
            ++ L+ +AT      +  + +P++V R+S A
Sbjct: 299 AEMLLSRIATPHALPAEKRLVTPSVVVRESTA 330