Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., LacI family transcription regulator (RefSeq) from Shewanella loihica PV-4

 Score =  164 bits (415), Expect = 3e-45
 Identities = 105/335 (31%), Positives = 173/335 (51%), Gaps = 4/335 (1%)

Query: 3   TIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTNTI 62
           TI DVA+ AGVS+ TVSRV N  P   QA+ID V  A+  L Y+PN AAR L    +  I
Sbjct: 4   TINDVAKYAGVSIKTVSRVTNNEPSVRQATIDKVNQAIAALNYQPNVAARNLAGTKSYVI 63

Query: 63  GVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRAL-ELLINSRCDALVI 121
             +  + +  +   +   + +   + G  LLI     +++   + L +++ ++R   LV+
Sbjct: 64  AFVYDNPNAYYVIDMQNGILSSCKQRGYELLIHPCDAKSDNICQELVDMVRHARLSGLVL 123

Query: 122 HSKALPNEELIEYANEVKT---LVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRN 178
                 + +++   +++      ++    +       I ++++ GA   T  LI  GH+N
Sbjct: 124 TPPLSEDPKVLAALDQINANYVRIIAGEEVSTTDGLSILVNDKHGAVSITQHLIDLGHKN 183

Query: 179 IACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPF 238
           IA +S  HQ E   +R+AG++ AL  + ++L  S I       E G +    LL K+   
Sbjct: 184 IAFLSGDHQHESTKERLAGFKAALQSNHLSLDESNIINGQYSFESGVEGAKTLLAKANRP 243

Query: 239 TAVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEK 298
           TA+VA ND +AAGAL      G ++P+ +S++GF+D+  SR   P+LTTV  P +L+A+ 
Sbjct: 244 TAIVACNDEIAAGALFAARLAGVAIPDELSIVGFEDSPFSRQTWPKLTTVHQPNKLIAQT 303

Query: 299 ATQLALALATDAPRENDPMIFSPTIVRRDSVAQKR 333
           AT+L +    +   E    +F P  V RDS A  +
Sbjct: 304 ATELLIENQGNKQSETAHQVFIPEPVLRDSSASPK 338