Pairwise Alignments

Query, 483 a.a., RimK family alpha-L-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., ribosomal protein S6 modification protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 14/225 (6%)

Query: 233 LGEFDGLFIRATTNISNYTYRFAKTAEKMGLVVMDDSESIMKCTNKVFLTELLETNKVPA 292
           L  FD +  R   +I+ Y     +  E MG+  ++DS  I +  +K+   +L+    +  
Sbjct: 55  LPPFDAVIPRIGASITFYGSAVLRQFEMMGVYALNDSVGISRSRDKLRSMQLMSRRGIGL 114

Query: 293 PKSVIIRSFDPEWKTGLMEQLD-FPMVLKIPDGAFSRGVVKVRNEQELEKEAGTLFEKSA 351
           P +       P     L++ +   P+V+K+ +G    GVV     +  E          A
Sbjct: 115 PITGFANK--PSDIPDLIDMVGGAPLVIKLLEGTQGIGVVLAETRKAAESVIEAFMGLKA 172

Query: 352 LILAQAFMP--TDFDWRIGVMNRQAIFACKYMMSRGHWQIYQHHNSGRVTAGGFETLDLK 409
            I+ Q ++      D R  V+  + + A K     G ++   H        GG  T  L 
Sbjct: 173 NIMVQEYIKEANGADIRCFVLGDKVVAAMKRQAMPGEFRSNLHR-------GG--TASLV 223

Query: 410 QVPKHVVDVAVKAANLIGGGLYGVDLKEIDGQVYVIEVNDNPSID 454
           ++      VA++AA  +G  + GVDL   +    V+EVN +P ++
Sbjct: 224 KLTPEERSVAIRAAKTMGLNVAGVDLLRSNHGPLVMEVNSSPGLE 268