Pairwise Alignments

Query, 483 a.a., RimK family alpha-L-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., ribosomal protein S6 modification protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 17/241 (7%)

Query: 220 MNLETISPD---DLSRLGEFDGLFIRATTNISNYTYRFAKTAEKMGLVVMDDSESIMKCT 276
           MN+ +I P        L  FD +  R   +++ Y     +  E MG+   +DS SI +  
Sbjct: 39  MNINSIKPSIHYQGQELTGFDAIIPRIHASVTFYGCAVVRQFEMMGVFAANDSISIARSR 98

Query: 277 NKVFLTELLETNKVPAPKSVIIRSFDPEWKTGLMEQL-DFPMVLKIPDGAFSRGVVKVRN 335
           +K+   +LL    +  P +       P     L+  +   P+V+K+ +G    GVV    
Sbjct: 99  DKLRALQLLSRKGIGMPITGFANK--PNDIPDLINMVGGAPLVIKLLEGTQGIGVVLAET 156

Query: 336 EQELEKEAGTLFEKSALILAQAFM--PTDFDWRIGVMNRQAIFACKYMMSRGHWQIYQHH 393
           +   E          A I+ Q ++      D R  V+  + + + K     G ++   H 
Sbjct: 157 KTAAESVIEAFLGLKANIMLQEYIKESNGSDIRCFVVGDKVVASMKRQGPEGDFRSNLH- 215

Query: 394 NSGRVTAGGFETLDLKQVPKHVVDVAVKAANLIGGGLYGVDLKEIDGQVYVIEVNDNPSI 453
                  G  E + +    + +   AVKA  L+   + GVD+   +    ++EVN  P I
Sbjct: 216 -----LGGCGEKVKITPKERKMAVAAVKAMGLV---VAGVDILRSNRGPLILEVNSAPGI 267

Query: 454 D 454
           +
Sbjct: 268 E 268