Pairwise Alignments

Query, 414 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., NnrS family protein (RefSeq) from Shewanella loihica PV-4

 Score =  265 bits (677), Expect = 2e-75
 Identities = 152/387 (39%), Positives = 216/387 (55%), Gaps = 18/387 (4%)

Query: 35  AVLRLGFRPFFLLGSIYAVIAILAWVWMFQAGQPQLLQVPALWWHVHEMLFGFAMAIVAG 94
           A+LRLGFRPFFL G++++++A+  W                LWWH HEMLFGF MAIVAG
Sbjct: 15  ALLRLGFRPFFLFGALFSLVALALWGSFLTGRLGFTPHGNPLWWHGHEMLFGFVMAIVAG 74

Query: 95  FLLTAVQNWTGITGTKSHRLAGIVALWLMVRILFWLPVPLW----LTSSIEALFLLAVAY 150
           FLLTA Q WTG    K   L  +  LWL  RIL  L    W    + + ++ LF  A A 
Sbjct: 75  FLLTASQTWTGQKSIKGWPLGALFLLWLAPRIL--LANNQWGSFEVVAMLDLLFAPAAAL 132

Query: 151 EVGLRVVKAKGWRNLFFIPLFLLAIAANFASYATIKGMPPFPSSAVWQAMLWWFMLLLSV 210
            +  +V+  K WRN  FIP+ LL   AN  SY  +        S  +       + ++++
Sbjct: 133 VLARQVIAVKQWRNFAFIPILLLLTVANALSYYGVSSQNSLLVSHAFHGATILMVTIVAL 192

Query: 211 MGGRVIPFFTARRFQFTKAEPILALDVIANGSLLALFVLSFFPLTMAQLGQPLML---VA 267
           +GGRVIPFFT R  Q+ + + I  L+ +   SL+ALF+      ++A     +ML   VA
Sbjct: 193 IGGRVIPFFTDRATQWQRLDNISWLEKLTFVSLMALFIAMLIGQSLA-----IMLCAAVA 247

Query: 268 GVAQLIRFLRWQPWRTFSEPLVWSLHAAYLCIPLSLLLRGGVSNAWLNHNLLHLFAIGAL 327
           G+  L+R+ RW    TF  PL+WSLH +YLCIP+ LLL    ++       LH   +G L
Sbjct: 248 GITLLVRWSRWGVQSTFGVPLLWSLHLSYLCIPVGLLLIAVGASVSAG---LHAMTVGGL 304

Query: 328 SGLVLSMIARVTMGHTGRAIYQGPNMQWAFIALLLAAVVRGVGVGLLPQQLLIWVNLSAA 387
            G++L+M+ARV++GHTGR +     M  AF  +L++ + R V   L P Q ++W+ ++  
Sbjct: 305 GGMILAMMARVSLGHTGRNLLPPKVMTGAFALILISTITR-VLASLFPAQFMLWLTIALV 363

Query: 388 LWVIAFALFVLRFGAMLLKPRVDGHPG 414
            W+ AF  FV+ +  +LL PRVDG PG
Sbjct: 364 AWIFAFGTFVICYAPILLTPRVDGRPG 390