Pairwise Alignments

Query, 414 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  256 bits (654), Expect = 8e-73
 Identities = 155/390 (39%), Positives = 231/390 (59%), Gaps = 15/390 (3%)

Query: 29  VEERIPAVLRLGFRPFFLLGSIYAVIAILAWVWMFQAGQPQLLQ-VPALWWHVHEMLFGF 87
           ++ ++P + RLGFRPFFL  S+++++++  W   F AG   L   +  LWWH HEM+FGF
Sbjct: 10  LQPKLP-LFRLGFRPFFLFASLFSLLSLGIWGG-FLAGNALLPNSINPLWWHGHEMIFGF 67

Query: 88  AMAIVAGFLLTAVQNWTGITGTKSHRLAGIVALWLMVRILFWLP--VPLWLTSSIEALFL 145
             A+VAGFLLTAVQNWTG  G K   LAG+  +WL+ R+LF LP  +P  +T  I+ LFL
Sbjct: 68  VCAVVAGFLLTAVQNWTGQPGLKGLPLAGLFIVWLLPRLLFILPLDIPFVITMIIDLLFL 127

Query: 146 LAVAYEVGLRVVKAKGWRNLFFIP-LFLLAIAANFASYATIKGMPPFPSSAVWQAMLWWF 204
              A  + + V+K + WRN  FIP L LL +    + Y  I     +  + ++ A++   
Sbjct: 128 PLTAVLLSISVIKVRQWRNFVFIPILSLLTLFNGLSYYGLISDQLHWTHNGLYAAII-LI 186

Query: 205 MLLLSVMGGRVIPFFTARRFQFTKAEPILALDVIANGSLLALFVLSFFPLTMAQLGQPLM 264
            ++++++GGRVIPFFT R  Q+ K  PI  L+ ++  SLLAL    F  LT   L + L 
Sbjct: 187 AVIVALLGGRVIPFFTERAAQWQKPMPIPLLEFLSFASLLALIASLF--LTQLLLTRSLA 244

Query: 265 LVAGVAQLIRFLRWQPWRTFSEPLVWSLHAAYLCIPLSLLLRGGVSNAWLNHNLLHLFAI 324
            +AG   L+R+ RW    ++S PL+WSLH +YLCIP+ L   G ++        +H   +
Sbjct: 245 GIAGCVLLLRWSRWGWHASWSVPLLWSLHLSYLCIPIGL---GLIATGLPLSVGMHAITV 301

Query: 325 GALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIALLLAAVVRGVGVGLLPQQLLIWVNL 384
           G L G++L+M++RV++GHTGR +     M  AF  +L AA++R +    LP    I + L
Sbjct: 302 GGLGGMILAMMSRVSLGHTGRPLKPARPMALAFGLILFAALLRVLAG--LPSAWFIELML 359

Query: 385 SAAL-WVIAFALFVLRFGAMLLKPRVDGHP 413
           +A + W++AF  F   +  ML + RVDG P
Sbjct: 360 AAIICWMLAFGCFCYCYAPMLCRVRVDGRP 389