Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., LysR family transcriptional regulator PA3398 from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (556), Expect = 1e-61
 Identities = 115/287 (40%), Positives = 176/287 (61%), Gaps = 2/287 (0%)

Query: 6   SLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEG 65
           +L+QL+VF  + Q +S++ AA  L LS++A S +++ELE+Q    LFDR   RL LN  G
Sbjct: 24  TLRQLQVFVAVAQQESVSRAAGQLNLSQSAASTSITELERQSSCQLFDRAGKRLSLNALG 83

Query: 66  QKLLPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHPSQ 125
           ++LLP A  LL +AK+I+ L   +    G L +G++ TIGN +A  LI  F Q HP    
Sbjct: 84  KQLLPQAVALLDQAKEIEDLLNGKSGF-GSLAVGATLTIGNYLATLLIGGFMQRHPESQV 142

Query: 126 SLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQERLV 185
            L + N+A +  ++  YE+D+GLIEG   HP++    + +DE+ + CAP HPLA++ +  
Sbjct: 143 KLHVQNTANIVHQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRGQAT 202

Query: 186 MSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCLSR 245
           M +  H  W+LRE GSG+R  F + +           EL  TEA+  +V SGLG+GC+SR
Sbjct: 203 MEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCISR 262

Query: 246 LAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPLLRQFIEFC 291
           LA +   + G +V +  P +D+ R+F+ + HK+KYQ   +R+F+E C
Sbjct: 263 LALRDAFRRGSLVAVETPDMDLARQFYFIWHKQKYQTSAMREFLELC 309