Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  210 bits (535), Expect = 3e-59
 Identities = 118/300 (39%), Positives = 179/300 (59%), Gaps = 2/300 (0%)

Query: 5   ISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQE 64
           I+L+QL++F  IT+  S T A   L LS++A S AL+ELE  LG  LFDRV  RLVLN  
Sbjct: 3   INLRQLQIFCAITRCGSTTSAGSALALSQSATSAALNELESALGTRLFDRVGKRLVLNDS 62

Query: 65  GQKLLPMADELLQRAKDI-DRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
           GQ LLP A ++L+ A+ I D        L  +LRIGSS TIGN V P ++ A R   P  
Sbjct: 63  GQALLPRAMKMLENAQQIEDSFLLPDAALNARLRIGSSSTIGNYVVPQIVGALRGSTPQL 122

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
              + I NSA + +K+  +E+D+GLIE     PELI+  +  DEM I+    HPLA +E 
Sbjct: 123 RIDVDIGNSALIARKVAQFEIDMGLIEAPCHLPELIAEPWLVDEMVIVAGRAHPLAGEEH 182

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCL 243
           + + + + ++W+LRE GSG+RE    ++   +    +  ++ ++EA++ +++ G+G+ CL
Sbjct: 183 VSLGELQSAEWLLREQGSGTREEVEHLLLRHLHDLQDMRQVGSSEAIMRTLAQGIGISCL 242

Query: 244 SRLAAKTPQQDGRVVILNIPL-DMKRRFWMLVHKEKYQNPLLRQFIEFCPQWASQSALLQ 302
           SR         G++  L  PL  + RRF+M+ H++K+ +P L +F E C Q A Q+  L+
Sbjct: 243 SRRVVADLLASGQLRTLASPLPPLNRRFFMIRHRDKFISPSLERFREACRQAADQADTLR 302