Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  201 bits (511), Expect = 2e-56
 Identities = 112/298 (37%), Positives = 177/298 (59%), Gaps = 2/298 (0%)

Query: 5   ISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQE 64
           +SL+QL++F  + QH S T AA  + LS++A S AL+ELE  L   LFDRV  RLVLN  
Sbjct: 3   LSLRQLQIFCAVAQHGSTTSAAISVSLSQSATSAALNELESALDTRLFDRVGKRLVLNDN 62

Query: 65  GQKLLPMADELLQRAKDIDRLFAEQQV-LTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
           G  LLP A  +L+ A+ I+  F      L  +LR+G S TIGN V P ++   RQ  PH 
Sbjct: 63  GHALLPQARRMLENAQQIEASFLPGHAGLKTRLRVGCSTTIGNYVLPLILGELRQSTPHL 122

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
              + ++NS  + +++ D+E+D+GLIEG    PEL +  +  DE+ I     HPLA +++
Sbjct: 123 RVDVDMANSMAIARRVADFEIDMGLIEGPCHLPELSAEPWLIDELLIAAGQRHPLALKQQ 182

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCL 243
           + + D   ++W+LRE GSG+RE   +++   +    E  ++ ++EA+ ++++ G+G+ CL
Sbjct: 183 VTLDDLRTAEWLLREPGSGTREEVEQLLLRHLHDLAETRQIGSSEAIKHTLAQGIGISCL 242

Query: 244 SRLAAKTPQQDGRVVILNIPLD-MKRRFWMLVHKEKYQNPLLRQFIEFCPQWASQSAL 300
           SR   +       +V L   L  + RRF+++ H++KY +P L +F E C Q+ SQ  L
Sbjct: 243 SRWVVRDLLASEVLVELPHALPALTRRFFLIRHRDKYISPGLERFWEKCSQFVSQEQL 300