Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transcriptional regulator, LysR family from Synechococcus elongatus PCC 7942

 Score =  108 bits (271), Expect = 1e-28
 Identities = 85/310 (27%), Positives = 151/310 (48%), Gaps = 19/310 (6%)

Query: 6   SLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEG 65
           +L QLR+   I    S   AA+ L +S+ AVS+ +  LE+QL   LFDR   R  L + G
Sbjct: 7   TLDQLRILRAIAAEGSFKRAADSLYVSQPAVSLQVQNLERQLNVPLFDRGGRRAQLTEAG 66

Query: 66  QKLLPMADELLQRAKDIDRLFAEQQVLT-GKLRIGSSDTIGNQVAPYLISAFRQLHPHPS 124
             LL   + +L    +  R   + Q L  G L IG+S T G  + P +I  FRQ +P  +
Sbjct: 67  HLLLSYGERILSLCAETCRAIEDLQNLQGGTLIIGASQTTGTYLLPRMIGRFRQRYPDVA 126

Query: 125 QSLFISNSAQVCQKLVDYELDIGLIEGKT---LHPELISTQFSQDEMCIICAPDHPLAQQ 181
             L + ++ +    + + ++D+ +I G+    L   L++  +++DE+ +I    HPL QQ
Sbjct: 127 VQLHVHSTRRTSWSVANGQIDLAIIGGEVPTELQDSLVTIPYAEDELALILPVSHPLTQQ 186

Query: 182 ERLVMSDFEHSDWVLREAGSGSREFFLRVIAP--------RIEHWIEAFELNTTEALINS 233
             +   D     ++  ++ S  R+   +V++         RIE      ELN+ EA+ N+
Sbjct: 187 ASIQREDLYKLQFIALDSQSTIRKVIDQVLSRSGIETRRLRIE-----MELNSIEAIKNA 241

Query: 234 VSSGLGLGCLSRLAAKTPQQDGRVVILNI-PLDMKRRFWMLVHKEKYQNPLLRQFI-EFC 291
           V +GLG   +S  A +   + G +       L ++R   ++ +  +Y++     F  E  
Sbjct: 242 VQAGLGAAFVSVSAIEKELEMGSLHRAQTNDLCVQRTLSVIYNPNRYRSKAAVAFSQEIL 301

Query: 292 PQWASQSALL 301
           P +A++++ L
Sbjct: 302 PDFATENSPL 311