Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., ndhF3 operon transcriptional regulator from Synechococcus elongatus PCC 7942

 Score =  103 bits (256), Expect = 7e-27
 Identities = 67/242 (27%), Positives = 124/242 (51%), Gaps = 2/242 (0%)

Query: 4   HISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQ 63
           +++L QL+VF    +H S T AAE L L++  VS+ + +L K +G  LF+++  RL L +
Sbjct: 3   NLTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYLTE 62

Query: 64  EGQKLLPMADELLQRAKDIDRLFAE-QQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPH 122
            G++L     ++ ++ + +D   A+ Q +  G+LR+ +  T      P LI  F Q +P 
Sbjct: 63  AGRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRL-AVITTAKYFIPRLIGPFCQRYPG 121

Query: 123 PSQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQE 182
            + SL ++N   +  ++ D   D+ ++       ++    F  + + ++    HPLA Q 
Sbjct: 122 INVSLKVTNHEGLINRINDNLDDLYVLSRPPSGFDITVQPFLDNPLVVVGPASHPLANQR 181

Query: 183 RLVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGC 242
            + +       ++LRE GSG+RE   ++ A    +     +L + EA+  ++  GLGL  
Sbjct: 182 GISLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAIKQAILGGLGLAV 241

Query: 243 LS 244
           LS
Sbjct: 242 LS 243