Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  179 bits (453), Expect = 9e-50
 Identities = 105/289 (36%), Positives = 166/289 (57%), Gaps = 3/289 (1%)

Query: 5   ISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQE 64
           ++L+QL VF  I +   ++ AA+ L ++  A S+AL+ELEKQL   LF+RV NRL LN +
Sbjct: 3   MTLRQLEVFEAIARSGQVSKAAQWLGMTGPAASMALAELEKQLSVRLFERVGNRLRLNAQ 62

Query: 65  GQKLLPMADELLQRAKDIDRLF-AEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
           G +LLP+A ELL +A  ++ LF A   VL G+L++G+S TIGN +      AF Q H   
Sbjct: 63  GAQLLPLATELLAQASKVEALFNASGAVLAGELKVGASTTIGNFLLAKAAVAFGQQHLDA 122

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
              + I N++ V +++ ++E+++G IEG  +   L    + QD +C+ C P HPLA + +
Sbjct: 123 LVDVSIHNTSAVIEQVANFEVELGFIEGHCVDRRLDVRAWHQDHLCVFCHPAHPLAGR-K 181

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCL 243
           + + +     WVLRE GSG+RE F+        H    F  +T +A+  +V  G GLG L
Sbjct: 182 VSVDEVRQQYWVLREEGSGTREHFVNAAHALGLHPEARFCFSTADAIKLAVKQGAGLGVL 241

Query: 244 SRLAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPLLRQFIEFC 291
           S LA +       + ++ +  L + R F+++ HK +    L   F++FC
Sbjct: 242 SELALERELARRELALIEVTGLSITRPFFLIRHKSRQSTALANAFVQFC 290