Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  143 bits (361), Expect = 4e-39
 Identities = 93/282 (32%), Positives = 149/282 (52%), Gaps = 7/282 (2%)

Query: 6   SLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEG 65
           +LKQ+ VF  +   +S++ AA  L ++++AVS++L +LE  LG  LF R  NRL+L+  G
Sbjct: 4   TLKQMSVFDAVASLESVSGAARKLSMTQSAVSMSLQQLESLLGRPLFIRQGNRLMLSHWG 63

Query: 66  QKLLPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHPSQ 125
             L P A +LL  A+ I     +Q +L+G L +G+S T    +   LIS      P    
Sbjct: 64  HWLRPRARKLLADAQQIAMGLHDQHLLSGSLSMGASQTAAEHLLGDLISRLDSDFPQIHI 123

Query: 126 SLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQERLV 185
            L + N+  V   + +YE+D G+IEG++    L+   +  D + +I AP HP  +   + 
Sbjct: 124 ELMVENTENVITAVQEYEVDFGIIEGRSDDAHLVLEPWLDDHLVVIAAPHHPYGKYGNVS 183

Query: 186 MSDFEHSDWVLREAGSGSREFFLRVI---APRIEHWIEAFELNTTEALINSVSSGLGLGC 242
           +S  E + WVLRE G+G+R  F   I     R+  W E  ++   +AL   V +G  L  
Sbjct: 184 LSQLEQAKWVLREQGAGTRRIFDAAIHGNLDRLNVWREYEQVPVLKAL---VKNGPYLSA 240

Query: 243 LSRLAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPL 283
           L  L  +     G+++IL+ P L+MKR+   +   +  +NPL
Sbjct: 241 LPYLDVERDVAAGQLIILSTPKLNMKRQLSFVWRADATENPL 282