Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 8/290 (2%)

Query: 6   SLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEG 65
           +L+QLR    +    +   AAEV  +S+  +SV ++E+E  LG  LF+R    +VL   G
Sbjct: 3   TLRQLRYIVAVADTLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVVLTPIG 62

Query: 66  QKLLPMADELLQRAKDI-DRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHPS 124
           +++   A  +L+ A +I D   + +  L+G LR+G   T+G  + PY++SAFR+ HP   
Sbjct: 63  REIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSLR 122

Query: 125 QSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQERL 184
             L    S ++ ++L   ELD+ L++       L       + + +   PDH LA + R+
Sbjct: 123 LYLREDPSLRLERRLRAGELDLILVDMPIDDAGLDIMDLFFEPLWLAAPPDHALADRTRV 182

Query: 185 VMSDFEHSDWVLREAGSGSREFFL---RVIAPRIEHWIEAFELNTTEALINSVSSGLGLG 241
            + D    D +L E G   R+  L   R +  R EH    F+  + + L   V+S +GL 
Sbjct: 183 SVEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAR-EH--GGFQATSLDTLRQMVASRIGLA 239

Query: 242 CLSRL-AAKTPQQDGRVVILNIPLDMKRRFWMLVHKEKYQNPLLRQFIEF 290
            L  L  A    QD  + ++       RR  +   K   +    R+F  F
Sbjct: 240 LLPDLYVAAEAAQDPNIRMIPFSAPPVRRVGLAWRKTSARVAEFREFGAF 289