Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  414 bits (1064), Expect = e-120
 Identities = 205/300 (68%), Positives = 244/300 (81%)

Query: 1   MASHISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLV 60
           MASHISLKQL+VF+T+TQHK+LT AA+ L LSKAAVS+ALSELEKQLGH LFDRVNNRL+
Sbjct: 1   MASHISLKQLKVFSTLTQHKTLTAAADGLFLSKAAVSMALSELEKQLGHNLFDRVNNRLI 60

Query: 61  LNQEGQKLLPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLH 120
           LNQEG KL P+ADELL RA DI++LF ++Q L+G LRIG+SDT+GNQVAPYL+S FR+  
Sbjct: 61  LNQEGHKLQPLADELLHRAGDIEQLFNDEQSLSGLLRIGASDTLGNQVAPYLLSDFRRHT 120

Query: 121 PHPSQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQ 180
            H  QSLFISNS Q+C  L+ YELDI LIEGK  HPEL +T FS DEMC+IC PDHPL  
Sbjct: 121 QHELQSLFISNSTQICDMLIAYELDIALIEGKIQHPELDATPFSSDEMCVICPPDHPLPA 180

Query: 181 QERLVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGL 240
              + +   E S W+LREAGSGSREFFLRV+APR+E W EAF+LN TEALINSVS+GLGL
Sbjct: 181 DSDIPLHHLEASHWILREAGSGSREFFLRVVAPRLEQWHEAFQLNNTEALINSVSAGLGL 240

Query: 241 GCLSRLAAKTPQQDGRVVILNIPLDMKRRFWMLVHKEKYQNPLLRQFIEFCPQWASQSAL 300
            CLSRL+A+   +DGRV +L++PL+MKRRFW+LVHKEKY +PLL+ FI FC  W  +  L
Sbjct: 241 ACLSRLSAEPAIRDGRVKVLSLPLNMKRRFWLLVHKEKYLSPLLKTFIAFCHDWEREHQL 300