Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  151 bits (381), Expect = 2e-41
 Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 7/282 (2%)

Query: 6   SLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEG 65
           SLKQ+ VF  +   +S++ AA  L ++++AVS++L +LE  LG  LF R  NRL L+  G
Sbjct: 4   SLKQIMVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLSHWG 63

Query: 66  QKLLPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHPSQ 125
             L P A  LLQ A+ I+    EQ +++G+ R+ SS T    + P LIS      P    
Sbjct: 64  NWLRPRARRLLQDAQQIELGLHEQHLISGRFRLCSSQTAAEHLLPELISKIDTDFPELRI 123

Query: 126 SLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQERLV 185
            L + N+  V + L++YE D G+IEG+     L   Q+  D + ++ +P HP A+Q  + 
Sbjct: 124 ELTVENTENVVEGLLNYEYDFGIIEGRNDDSRLYQEQWLDDHLVVVASPHHPYAKQTNIS 183

Query: 186 MSDFEHSDWVLREAGSGSREFF---LRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGC 242
           ++  E + WVLRE G+G+R  F   +  +  ++  W E   ++  +AL   V +G  L  
Sbjct: 184 LAQLEQARWVLREQGAGTRRIFEGAIHGVIEKLHVWKEYEHVSLLKAL---VKNGPYLSS 240

Query: 243 LSRLAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPL 283
           L  L  +     G +VIL  P L+M+R    +   +  +NPL
Sbjct: 241 LPFLDVEKEVAAGELVILPTPQLNMQRHLSFVWRCDSGENPL 282