Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., transcriptional regulator, LysR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  110 bits (274), Expect = 6e-29
 Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 14/295 (4%)

Query: 5   ISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQE 64
           +  ++L  F  + + +S + A   L LS+  +S  +  LEK+LG  L DR+  +++    
Sbjct: 2   LDFRRLEAFCKVYELRSFSRAGADLFLSQPTISAHVLALEKELGVRLLDRMGRQVLPTPA 61

Query: 65  GQKLLPMADE----LLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLH 120
           G+ L   A E    L     +I +L  E   ++G L +G S    + V P +I+ F + +
Sbjct: 62  GEVLYRRASEAFASLAAAEAEIGQLRDE---VSGDLVVGGSTIPAHHVLPEVIAGFVRTY 118

Query: 121 PHPSQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQ 180
           P     L + ++A + Q++ D EL +GL+     HP+L+      DE+ ++ AP+  LA 
Sbjct: 119 PAVRVHLRVGDTADIVQRVTDGELMLGLVGAVDSHPDLVFEPLVDDELVVVAAPE--LAG 176

Query: 181 QERLV-MSDFEHSDWVLREAGSGSREFFLRVIAPR---IEHWIEAFELNTTEALINSVSS 236
             R V + +     W++REAGSG+R  F   +      +     A  +++T+A++  V +
Sbjct: 177 GRRHVQVEELAQWPWIMREAGSGTRRTFAEALTAAGMDVRRLPVALVVDSTQAVVQYVRA 236

Query: 237 GLGLGCLSRLAAKTPQQDGRVVILNI-PLDMKRRFWMLVHKEKYQNPLLRQFIEF 290
           GLG+   SRLA       G +V L +      R+F  + H  ++Q P    F  F
Sbjct: 237 GLGVSATSRLAVAESIARGELVELKLDDCRPARQFHSVRHARRHQFPAAVAFAAF 291