Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 78/291 (26%), Positives = 140/291 (48%), Gaps = 10/291 (3%)

Query: 7   LKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEGQ 66
           +   + F    + KS + AA+ L +++  VS  +S LEK     LF R    + L  EG 
Sbjct: 5   ISYFQTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGN 64

Query: 67  KLLPMADELLQR---AKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
            L   A++LL+    AK   R+  E     G +RI +S T G  + P +I  + +++   
Sbjct: 65  ILYENAEKLLENISNAKQQMRILHEHP--EGLIRIAASTTPGEHLLPSIIKDYTKVYRDV 122

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
           S  + I++S +  + L D  +DI +  G        S    +D + ++  PDH LA++  
Sbjct: 123 SFQIQITDSEKCFKLLEDRAVDI-IAVGNIYDGSYESEVIGKDRLVLVVPPDHELAKKGV 181

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIE---AFELNTTEALINSVSSGLGL 240
             +SD    D++ RE GSG+RE F+  +  +    ++      L +  ++I +VS G G+
Sbjct: 182 AKLSDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYGI 241

Query: 241 GCLSRLAAKTPQQDGRVVILNI-PLDMKRRFWMLVHKEKYQNPLLRQFIEF 290
             +S + AK     G++ I+ I  LD+ R  +++  K+      ++ F +F
Sbjct: 242 SIISEIPAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDF 292