Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  164 bits (415), Expect = 2e-45
 Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 3/289 (1%)

Query: 5   ISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQE 64
           I+L+QL VF  + +   +  AAE + LS  A S+AL+ELEKQL   LF+R+ NRL LN +
Sbjct: 3   ITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQ 62

Query: 65  GQKLLPMADELLQRAKDIDRLFAEQ-QVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
           G  LLP+A +LL R + I++ F  Q   L G+L + +S TIGN +      AF Q H   
Sbjct: 63  GNLLLPLAADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHTQT 122

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
              + I+N+  V Q +  +  ++G IEG      L    + +D + + C P HPLA Q  
Sbjct: 123 HVEVAITNTQDVIQSVAQFRAEMGFIEGHCTDNRLHIEPWHKDRLLVFCHPAHPLAGQ-T 181

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCL 243
           +     +   WVLRE GSG+RE+F+             F   T +A+  +V  G GLG L
Sbjct: 182 VKSFAVKGQSWVLREEGSGTREYFVNAANELGMQPESKFCFTTPDAIKLAVKQGAGLGVL 241

Query: 244 SRLAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPLLRQFIEFC 291
           S LA +       + ++ I  L ++R+F+ + HK +    L   F++FC
Sbjct: 242 SELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFC 290