Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., HTH-type transcriptional activator CmpR from Enterobacter sp. TBS_079

 Score =  195 bits (495), Expect = 1e-54
 Identities = 105/289 (36%), Positives = 177/289 (61%), Gaps = 5/289 (1%)

Query: 4   HISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQ 63
           HI+L+QL VF  + +  S T A+++L LS++AVS AL++LE QLG  LFDRV  RLV+N+
Sbjct: 2   HITLRQLEVFAEVLKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNE 61

Query: 64  EGQKLLPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
            G+ L P A  LL++A +I++LF E+    G +R+ +S TIGN + P +I+ +R+  P  
Sbjct: 62  HGRLLYPRALALLEQATEIEQLFREE---NGAIRVYASSTIGNYILPEVIARYRRDFPTL 118

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
              + + NS  V   ++D+ +DIGLIEG   + ++I+  + +DE+ +  +P   L Q E 
Sbjct: 119 PLEMSVGNSQDVINAVIDFRVDIGLIEGPCHNVDIIAEPWLEDELVVFASPASSLLQGE- 177

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCL 243
           + +     + W+LRE GSG+RE    ++   + H+  + EL  +EA+ ++V  GLG+ CL
Sbjct: 178 VTLERLAQAQWILREQGSGTREIVDYLLLSHLPHFRLSMELGNSEAIKHAVRHGLGISCL 237

Query: 244 SRLAAKTPQQDGRVVILNIPL-DMKRRFWMLVHKEKYQNPLLRQFIEFC 291
           SR       + G +V + +PL  + R  W + H++K+ +  L++F+ +C
Sbjct: 238 SRRVIAEQLEAGTLVEIPLPLPKLVRTLWCIHHRQKHLSSSLQRFLRYC 286