Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  166 bits (419), Expect = 8e-46
 Identities = 105/290 (36%), Positives = 157/290 (54%), Gaps = 5/290 (1%)

Query: 5   ISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQE 64
           I+L+QL VF  + +   +  AAE + LS  A S+AL+ELEKQL   LF+R+ NRL LN +
Sbjct: 3   ITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQ 62

Query: 65  GQKLLPMADELLQRAKDIDRLFAEQQ-VLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
           G  LLP+A +LL R + I++ F  Q   L G L + +S TIGN +      AF Q H   
Sbjct: 63  GNLLLPLATDLLHRVEQIEQAFTRQDGDLVGHLSVSASSTIGNYLLAKAAVAFCQQHTQT 122

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
              + I+N+ +V Q +  +  ++G IEG      L    + +D + + C P HPLA Q  
Sbjct: 123 HVDVAITNTQEVIQSVAQFRAEMGFIEGHCTDNRLNIEPWHKDRLLVFCHPAHPLAGQ-T 181

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEA-FELNTTEALINSVSSGLGLGC 242
           +  +  +   WVLRE GSG+RE+F+   A  +    EA F   T +A+  +V  G GLG 
Sbjct: 182 VKPAAVKGQSWVLREEGSGTREYFVNA-ANELGMQPEAKFCFTTPDAIKLAVKQGAGLGV 240

Query: 243 LSRLAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPLLRQFIEFC 291
           LS LA         + ++ I  L ++R+F+ + HK +    L   F++FC
Sbjct: 241 LSELALDKDISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFC 290