Pairwise Alignments

Query, 322 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  337 bits (864), Expect = 2e-97
 Identities = 179/317 (56%), Positives = 231/317 (72%), Gaps = 6/317 (1%)

Query: 2   IRAAKAKVMGAPTPMAGLALGIASLGWSWENMI-AAHGVAQWVGAAIASVLLIVLAFKFL 60
           + A  AK+   P+P+ GLAL IASLGW+ EN++ +A+G+AQ  G+ + S+LL+ L  KF+
Sbjct: 23  LHAGAAKL---PSPLGGLALAIASLGWTLENILPSANGMAQLAGSLVGSLLLMALTIKFI 79

Query: 61  WHGHLLRQDLAHPVVGSVVPTFAMATMVVSASLGHFYPVAGDALWLFAVGLHILFLVSFL 120
            H  +L ++LAHPV+GSV+PT+AM  MVVS  LG++   AG+ LWL AV  H+ FL +F 
Sbjct: 80  LHPKILAEELAHPVLGSVIPTYAMGWMVVSRCLGNYVAGAGEILWLLAVAAHLGFLAAFC 139

Query: 121 YHRAQAFELHHMVPSWFVPPVGIIVADVSFSGHPALAPIAYACLVFGMLAYAVMLPMMIY 180
            HR + F L  MVPSWFVPP+GIIVA V+F  H     +A A L FGMLAY VMLP+M+Y
Sbjct: 140 IHRCRNFSLDSMVPSWFVPPIGIIVAAVAFPPHGPRV-LAEALLWFGMLAYLVMLPVMLY 198

Query: 181 RFIFTHEIPDAAKPTLAIMAAPASLSLAGYLTVVSEPSPVIVALLFGIAVLMTAIIYLAF 240
           R IF   +P+AA+PTLAI+AAPASLSLAGYL+++ EPS VI+ LL  +AVLMT+IIYLAF
Sbjct: 199 RLIFRAAVPEAAQPTLAILAAPASLSLAGYLSLIPEPSAVIIGLLLTLAVLMTSIIYLAF 258

Query: 241 TRLLRLPFSPGYAAFTFPMVIGATALFKMAHWMENIGVAEHYVAQVHWLASLELIVATVV 300
             LLRLPFSPG+AAFTFPMVIGATAL+K   W+ + G        +  LA+LEL VA  V
Sbjct: 259 FHLLRLPFSPGFAAFTFPMVIGATALYKTHDWLADHGHVGQLTLGLSHLANLELTVAAAV 318

Query: 301 VSYVAIRYLAFY-QPHK 316
           V +V+ +YLAFY + HK
Sbjct: 319 VLFVSAKYLAFYLKKHK 335