Pairwise Alignments

Query, 1148 a.a., exonuclease V subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 1134 a.a., exodeoxyribonuclease V gamma subunit from Paraburkholderia graminis OAS925

 Score =  402 bits (1034), Expect = e-116
 Identities = 345/1155 (29%), Positives = 525/1155 (45%), Gaps = 136/1155 (11%)

Query: 1    MFTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASELGVAANL 60
            M  +++SN+ ETL   L+  +   P  DP+  + ++V S  + + L++ +A+  GV AN+
Sbjct: 1    MLQLFYSNRYETLVGALLDDLAQAP-SDPWTAQPVIVPSAAVRRRLELDIAARQGVCANV 59

Query: 61   EFPLPATFIWQMFTQVLPDVPQRSAFNKEAMSWRLMELLPKLLDRTEFQP------LQRY 114
             F   A ++W     V+ +VP+ S F  + + WR   LL    D  E  P      L+ Y
Sbjct: 60   SFGYLAQWLWAQIGGVI-EVPRHSPFAPDRLVWRCYRLLG---DSNEALPWNASPRLRAY 115

Query: 115  LQDDEDDSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEDVVEIA--------------- 159
            L D  D S R++LA ++A + D YL YRP+W+L W+ G  +                   
Sbjct: 116  L-DAADPSMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFASGAADDTGPRLVGASEA 174

Query: 160  --DQHPWQPILWR----ELYAYTHKQGHSIYHRANLYQ-----RFIEQLASGDFD---RS 205
              +   WQ  LWR    EL       G +   +A         RF++++ + D D    +
Sbjct: 175  AREDERWQAALWRAVLTELAGEAGDAGGAGGAQAPAAALPPAYRFLDEIGTLDLDAIANA 234

Query: 206  TWPKRLFIFGISALPPRYIDALRAMGEHIDVHLMLTNPCQHYWGDIRDRKYLARVAAQKR 265
             WP+ + +F +  +PP ++  LRA+   +DV L + NPC+ +W D+        V+  + 
Sbjct: 235  RWPEAVSVFALPTMPPLHVALLRALSRWVDVRLYVMNPCREFWFDV--------VSEGRV 286

Query: 266  KILQINGEQVTIGSEVSPLKGDVENYLQESMHLSHAVGNSLLASMGKMGRDNLYLLAQND 325
            + L   G Q+       PL  +     Q  +H+ H +  S  A+ G+ G           
Sbjct: 287  QALDAAG-QLDYQEVGHPLLAEWGRQTQAQLHMLHELTES--AASGETGE---------- 333

Query: 326  QSELELFIEIQRDSLLHHIQADILHLQ-EHQDDAKFASSGHKPSIAAQDDSLQIALCHSP 384
                  F E    S L  +Q  IL L+ E Q D               +  +++ +CHS 
Sbjct: 334  ------FTENPEPSWLAAVQNSILDLRSETQADE-----------LPYEHGIEVHVCHSL 376

Query: 385  IREVEVLHDRLLAEFERDPSLKPRDVIVMVPDINAYAPYIQAVFGNAPG--ERFIPFSIS 442
             R++EVLHDRLL  F+   +L+P DV+V V D+ A  P I AVFG  P    R IP+ I+
Sbjct: 377  SRQLEVLHDRLLGWFDEFDNLEPSDVLVAVSDLAAAGPLIDAVFGTTPAGDTRRIPYRIT 436

Query: 443  DRSADQESPILTAFLQLLALPQSRCLASELLELLETPAIMARFAIDEEEFATAKRWVEEA 502
                 Q +P+    L  LALP+    A +L+E L   A+  R+ ID      A+ W+  A
Sbjct: 437  GLPPSQANPVARLLLDWLALPERSVGAPDLIEWLRVDAVAVRYGIDAGSLEAAQEWLAAA 496

Query: 503  GIRWGLNSDTGAEFELPASEQNTWQFGIERMLLGYAMPAEAGLYELGGQWLAPYNQVQGM 562
            G R GL+    +   +P + ++T+   + R+ LGYAMP + G  E    WL P     G 
Sbjct: 497  GARRGLSPAEPSGEHVPVA-RHTFADALTRLYLGYAMP-DGG--EPVDAWL-PVEGAGGS 551

Query: 563  SAELAGKLAHFVQTLSELRSQLAQTQSMEQWRYWLNELLERCFSVDLQGELALKTIRDSL 622
             AEL G+L+ FV  +    S+ A  Q+  +W   L E L +CF   +Q   +L  +RD++
Sbjct: 552  DAELLGRLSRFVDDVDSFASRCASEQTPAEWTQLLLETLAQCFDGGVQFAESLSAVRDAI 611

Query: 623  VNLKQQLADAGYQQAVSPA-IIRQVLTNKLSGTRISQRFLAGQVNFCTLMPMRSIPFRRV 681
              +   +  AG Q+   PA ++R  LT  L           G V F +L  +R +P+R V
Sbjct: 612  DKMSDAM-QAGAQEVTLPAAVVRGALTEALDDPARGG-VPWGSVTFSSLTSLRGLPYRVV 669

Query: 682  CLLGMNDGVYPPNEMVEGFDLRNVQRRVGDRSRREESRYLFLEALLSAKEQLYISYVGRS 741
            CLLGM+DGV P     + FDL     + GDR RR++ R LFL+ LL+A+ +L+I+Y GRS
Sbjct: 670  CLLGMDDGVLPSLARADEFDLMAAFGKAGDRQRRDDERNLFLDLLLAARSRLFIAYTGRS 729

Query: 742  IQDNSERVPSVLVSELLEYCEQNYCLAGDENLESDDSGRR-LVEHLTTQYPMVPFSPQ-- 798
            I+DN+   P+ LV ELL+Y  Q     G    E D++ R  +V+H    +    F+ Q  
Sbjct: 730  IRDNAPLPPAALVDELLDYLAQVSAGEGASPAEVDEARRAFIVDHPLQAFASEYFAAQPE 789

Query: 799  --AFIAGSFAREWLPAARRQGQSSADFLTPLSDYLLEVSWPMELDLVELQRFWRLPVEYF 856
               + A       L AA +Q  ++  F  PL     E + P+  D  +  RFWR P    
Sbjct: 790  LFTYDADRAELATLLAAPQQKTAAPFFDQPLPP---EDAAPVAFD--DFVRFWRHPARAV 844

Query: 857  FKRRLKVSFEPPLAVLEDDEPFALDGLSAYQLRDELVENLLAC---RDGAERDQVVAQFA 913
             + RL +      A L D EPF LD    Y  RD L   LL      D  + D +  +  
Sbjct: 845  LRDRLGIVLSDAQAELLDTEPFELD----YAGRDALAGRLLPVLLDTDDEDGDLMFDRVR 900

Query: 914  KQQRAQGKLPVAAFGDL----------ELAQSAQQALALA-EKIGFLCH-QPLEDEEIDL 961
            +   A  +LP  A G +          +LA S ++ +A   E++ F+    P   +  D+
Sbjct: 901  RVAEASPELPGGATGAVWRARELGALRQLADSVRREVASGIERLPFVLDIAPRWPDAADI 960

Query: 962  RLQPFDDGREVL---------LRGWLVKRYQSGLVRARSGAIRSEDLLAAWIDHLCLAAS 1012
                F    E L         L G L     +G V  R     + D L+AW+ HL   A+
Sbjct: 961  AGDLFGSHDEALREAAEAPLQLHGTLNLLTDTGQVIFRYAKPTARDYLSAWLAHLAYCAA 1020

Query: 1013 GKAVTTHLIGYERKEGVQHQMLPPLNDAQQAKTLLSELVALFCQGMNQPLAYFPKTALAC 1072
                    + +    G   ++ P      Q    L+ L ALF  G   PL +FPK+A A 
Sbjct: 1021 RPDGPRRTVWH--GSGESFELAPVAAPLDQ----LAPLAALFRAGRRLPLRFFPKSAWAK 1074

Query: 1073 VEAGFS--RGKWQED 1085
            V    S  +G W  D
Sbjct: 1075 VSESDSAAQGVWIND 1089