Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 727 a.a., ATP-dependent DNA helicase UvrD/PcrA from Pseudomonas fluorescens FW300-N2E2

 Score = 57.4 bits (137), Expect = 4e-12
 Identities = 122/515 (23%), Positives = 208/515 (40%), Gaps = 122/515 (23%)

Query: 350 LSFDDLLTQLSAALD--NDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQ 407
           + F +LL +   ALD   D  GLL    +    V ++DEFQDT+ +QY+ + RL L    
Sbjct: 189 IDFSELLLR---ALDLWRDHPGLLAHYQKRFRHV-LVDEFQDTNAVQYA-WLRL-LAKGG 242

Query: 408 CGLLMIGDPKQAIYAFRGADIFTYIKARNQVNAHY------TLGTNWRSSAAMVAAVNQV 461
             L+++GD  Q+IY +RGA     I+  +Q +A +       L  N+RS+A ++ A N +
Sbjct: 243 DSLMVVGDDDQSIYGWRGAK----IENIHQYSADFPDAEVIRLEQNYRSTAGILKAANAL 298

Query: 462 FSSATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQ 521
            ++ T                     K  W+  G+ +                  + YA 
Sbjct: 299 IANNTGRL-----------------GKELWTDGGEGE----------------AINLYAA 325

Query: 522 MAEACAAQ--IQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIAS 579
             E   A+  ++ I +A  +G A           D+A+L R+  ++R++ +AL ++ I  
Sbjct: 326 FNEHDEARYVVETIESALKTGLA---------RSDIAILYRSNAQSRVLEEALLRERIPY 376

Query: 580 VYLSNRDSVFASDVAQDIERLLLAVWQPED---ERLLRAAVAS-NLFALTASELDALNND 635
                +     +++   +  L L   +  D   ER++           + A    A ++ 
Sbjct: 377 RIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPTRGIGEKTVEAIRDHARHSH 436

Query: 636 ENEWE---QLIAEFRQYRR--------------LWSERGVLP---MLRAVLTQRHIAERW 675
            + WE   QL+       R              L ++ G +P   M + V+ Q  +    
Sbjct: 437 VSMWEAMHQLVVNKGMTGRAAGALKAFMDLIEDLAAKCGEMPLHLMTQTVIEQSGLIAYH 496

Query: 676 LAESEGERWLTDYLHISELLQQA----TREIDSD-QGLLRFLTQAMADAAQGLGGSDEQI 730
            AE +GE+      ++ EL+  A    + E D D   L  FL  A  +A       D Q 
Sbjct: 497 EAE-KGEKGQARVENLEELVSAARNFESTEEDKDLTPLSAFLGHASLEA------GDTQA 549

Query: 731 QRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNEEA 790
              E     +Q++T+H +KGLE+P VFL  +       EG +                  
Sbjct: 550 DEHEDS---IQLMTLHSAKGLEFPYVFLVGM------EEGLF---------------PHK 585

Query: 791 LAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLR 825
           ++  +  RL E+ RL YV +TRA+    +  A  R
Sbjct: 586 MSLEEPGRLEEERRLAYVGITRAMQNLVLTYAETR 620



 Score = 34.7 bits (78), Expect = 3e-05
 Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 9/63 (14%)

Query: 21 GARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDR 80
          G +L+ A AG+GKT          VL H  A        S   IL VTFT  A AE+R R
Sbjct: 25 GRQLVLAGAGSGKT---------RVLVHRIAWLIQVENASPHSILSVTFTNKAAAEMRHR 75

Query: 81 IRR 83
          I +
Sbjct: 76 IEQ 78