Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1189 a.a., ATP-dependent nuclease/helicase from Sinorhizobium meliloti 1021

 Score = 97.4 bits (241), Expect = 6e-24
 Identities = 206/910 (22%), Positives = 342/910 (37%), Gaps = 176/910 (19%)

Query: 25  IEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDRIRRR 84
           + A+AG+GKT+ +    +RL+L  GC  +          IL +T+T+AA +E+ +R+  +
Sbjct: 36  VSANAGSGKTHVLTQRVIRLLLA-GCRPSA---------ILCLTYTKAAASEMSNRVFEK 85

Query: 85  LHDARLAFARGASDDPLLRSLLAEFTDHNLAVSLLLSAERQMDEAA-------IFTIHGF 137
           L +          DD  L   +          + +  A R    A        I TIH F
Sbjct: 86  LAEW------ATLDDTTLEKRIEAIEGKRPPTAKIQEARRLFARALETPGGLKIQTIHAF 139

Query: 138 CQRMLTQNAFESGSRFENEFVTDESRLKAQVVADYWRR--------------QFYPLPIS 183
           C+ +L Q   E+       F   + R  A ++AD  R               + +   + 
Sbjct: 140 CEALLHQFPLEAN--VAGHFSVLDDRAAAVLLADARRALLTATAAASDGELAEAFATVLD 197

Query: 184 LASE--VRRLWPAPSALLAEIAGYLSGPP--------VKLTTPLMEGDLAALQQAQIARI 233
           LA +  + +L  A  A  A I  +L            ++    L  G+ A    A +  +
Sbjct: 198 LADDTGLEKLLAAIVANRAPIQAFLDHASGRGGMEAHLRAALGLEPGETAGTVMAAVWPL 257

Query: 234 CEIKQHWLVEREEIEPAVTGSDLHKNSQNALLRRLPILD--AWAQSETHDLHVPSELEEF 291
             +    L +  ++   + G+     +    LR +  +D  A   S+  +L      +  
Sbjct: 258 AGLNGPALDDYIDLGLRLGGAKPSAIADG--LRAVRAIDDAATRYSKLVELFFNGGGKPK 315

Query: 292 TQSGLLAKSKKGNPPQLAL------------FERIEAFLAEPVSLKTPLLVHAIHHCRHW 339
            +S  L  + +   PQL L             +R+        +    +L   ++     
Sbjct: 316 AESAFLNAAMRRAAPQLELRVEEARSHMLACVDRLSIVQMYGATRAALVLAERLNRDYEA 375

Query: 340 LAKAKSTHHWLSFDDLLTQLSAALDNDEQGL-LGERIRTLYPVAMIDEFQDTDPLQYSIF 398
           L KA+S    L F+DL+ + +A L   + G  +  ++       ++DE QDT P Q++I 
Sbjct: 376 LKKARSQ---LDFEDLIHRTAALLARSDVGAWVHYKLDQGIDHILVDEAQDTSPAQWTII 432

Query: 399 SRLYLDY--------PQCGLLMIGDPKQAIYAFRGADIFTY----------IKARNQVNA 440
             L  D+            +  +GD KQ+IY+F+GA    +          ++A N+  +
Sbjct: 433 QSLAADFFAGETARADDRTIFAVGDEKQSIYSFQGARPERFSRESTLTERRVRAGNKHFS 492

Query: 441 HYTLGTNWRSSAAMVAAVNQVF---------SSATHPFIYSDDIPFQP--------VAAS 483
              L  ++RS+  +++AV+ VF         S+ +   +++ +   QP        +A  
Sbjct: 493 PIRLQLSFRSTVDVLSAVDTVFANPGNARGLSARSEAIVHASNRIGQPGAVDLWDVIAPE 552

Query: 484 PGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASGAAT 543
           P A +  W+             P D    ++  +  A+       +I  +L         
Sbjct: 553 PAASEEDWTA------------PFDATPERAPVNILAR-------RIAAVLEDWIGRETV 593

Query: 544 FHRG--EAIEAGDLAVLVRTGNE-ARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERL 600
             +G   A+  GD+ VLVR  +     +  AL ++G   V  ++R  + +    QD+  L
Sbjct: 594 IEKGVRRAMRPGDVIVLVRKRDAFVNALTRALKRRGNIPVAGADRLVLTSHIAVQDLIAL 653

Query: 601 LLAVWQPEDERLLRAAVASNLFALTASELDALNNDENEWEQLIAEFRQ--------YRRL 652
              V  PED+  L A + S L  L   ++  L     E E L    RQ        Y   
Sbjct: 654 GRFVLLPEDDLSLAALLKSPLLDLGEEDVFELAARRTEGESLWRRLRQAGAEETSRYHEA 713

Query: 653 WSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYL--HISELLQQATREIDSDQGLLR 710
                    L   L       R L    G R     L   +S++L +             
Sbjct: 714 VRTLSRYSGLARELLPHDFYARVLGADGGRRAFLARLGSEVSDILDE------------- 760

Query: 711 FLTQAMADAAQGLGGSDEQIQRLE-----------SERRLVQIVTIHKSKGLEYPLVFL- 758
           FLT A+     GL G    I  LE            ER  V+++T+H +KGLE P+VFL 
Sbjct: 761 FLTFALDHERNGLPGLQAFISTLEIEAPTVKREQDKERDEVRVMTVHAAKGLEAPVVFLV 820

Query: 759 -----PFV---MSYRESSEGKYYDAESAT--TWVDLTGNEEALAKADQERL-----AEDL 803
                 FV   +S     E    D  + T   W        +L  AD ERL      E  
Sbjct: 821 DGGGEAFVRQQVSDLRFLEKAQVDHSTLTVPVWRAPGSAPNSLIAADNERLKKLAEEEYR 880

Query: 804 RLLYVALTRA 813
           RLLYV +TRA
Sbjct: 881 RLLYVGMTRA 890