Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., ATP-dependent DNA helicase Rep (RefSeq) from Shewanella amazonensis SB2B

 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 115/505 (22%), Positives = 193/505 (38%), Gaps = 104/505 (20%)

Query: 341 AKAKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSR 400
           A+    ++ L FDDL+   +  L ++E+  +  R +T     ++DE+QDT+  QY +   
Sbjct: 172 AQHMKAYNALDFDDLILLPTLLLRHNEE--VRRRWQTRIQYLLVDEYQDTNGSQYELVKL 229

Query: 401 LYLDYPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNA--HYTLGTNWRSSAAMVAAV 458
           L  +  +    ++GD  Q+IY++RGA     +       +     L  N+RSS  ++ A 
Sbjct: 230 LVGE--RARFTVVGDDDQSIYSWRGAKPQNLVLLGKDFPSLKLIKLEQNYRSSQRILRAA 287

Query: 459 NQVFSSATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDY 518
           N +   A +P +Y   + F  +A             G+    +T    E           
Sbjct: 288 NILI--ANNPHVYDKSL-FSELA------------YGEPMRVITALNEE----------- 321

Query: 519 YAQMAEACAAQ-IQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGI 577
             Q AE   A+ I+H      S             GD A+L R  +++R++  AL    I
Sbjct: 322 --QEAERVVAEIIRHRFVGKTS------------YGDYAILYRGNHQSRLIERALMTNRI 367

Query: 578 ASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELDALNNDEN 637
               LS   S FA    +DI   L  V  P+D+      V      +  + L+ L N  N
Sbjct: 368 -PYKLSGGTSFFARSEIKDIMAYLRLVVNPDDDNAFLRIVNLPKRGIGPATLERLGNFAN 426

Query: 638 --EWEQLIAEFRQYRRLWSERGVLPML----RAVLTQRHIAERWLAESEGERWLTDYLHI 691
                   A F     L      L  L    R ++    IAER     +  + L   ++ 
Sbjct: 427 SKHISMFAAIFEPELELHLGNSALSALEQFGRFIVETGDIAERG-EGVDAIKQLIRNINY 485

Query: 692 SELLQQATREIDSDQGLLRFLTQAMADAAQGLGGSD--------EQIQRLESERRL---- 739
            + L + +    + +  ++ +++      + L G D        E + RL     +    
Sbjct: 486 EDFLYETSPSAKAAEMRMKNISELYRWVTEMLNGDDLDEPMTLPEVVGRLTLRDMMERNS 545

Query: 740 -------VQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNEEAL- 791
                  VQ++T+H SKGLE+P VF                          + G EE + 
Sbjct: 546 EDEAGDQVQLMTLHASKGLEFPYVF--------------------------MIGMEERIL 579

Query: 792 ---AKADQERLAEDLRLLYVALTRA 813
                 D++ + E+ RL YV +TRA
Sbjct: 580 PHQTSIDEDNVEEERRLAYVGVTRA 604