Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., DNA-dependent helicase II (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 109/477 (22%), Positives = 188/477 (39%), Gaps = 110/477 (23%)

Query: 383 MIDEFQDTDPLQYSIFSRLYLDYPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNAHY 442
           ++DEFQDT+ +QY+    L  +     ++++GD  Q+IY +RGA I    +         
Sbjct: 218 LVDEFQDTNAIQYAWIRVLAGN--TANVMIVGDDDQSIYGWRGAQIENLHRFLQDFPGAK 275

Query: 443 T--LGTNWRSSAAMVAAVNQVFSSATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPA 500
           T  L  N+RS+  ++ A N++   A +P     ++                         
Sbjct: 276 TIRLEQNYRSTGNILKASNELI--ANNPDRMGKEL------------------------- 308

Query: 501 LTYWWPEDLD-KPQSKTDYYAQMAEACAAQIQHILTASASGAATFHRGEAIEAGDLAVLV 559
               W ED D +P S    + +M EA              G  +  + +    G+ A+L 
Sbjct: 309 ----WTEDKDGEPISLYCAFNEMDEA----------RFIVGRISDWQDKGGMLGECAILY 354

Query: 560 RTGNEARMVRDALSQQGIA-SVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVA 618
           R+  ++R++ +AL  +G+   +Y   R   F     +D    L  +   +D+      V 
Sbjct: 355 RSNAQSRVLEEALLHKGMPYRIYGGLR--FFERQEIKDAMGYLRLISNRDDDAAFERVVN 412

Query: 619 SNLFALTASELDALNNDENEWEQLIAEFRQYR-----------------------RLWSE 655
           +    +    LD L +   + EQL       R                       +L S+
Sbjct: 413 TPARGIGERTLDILRSTARK-EQLTLWQTSLRLLEEKVLSGRAANAVKGFLDLIVQLRSD 471

Query: 656 RGVLPMLR-AVLTQRHIAERWLAESE-GERWLTDYLHISELLQQAT-----REIDSDQGL 708
              LP+ R A    +H   + + E+E GE       ++ EL+  A       E++    L
Sbjct: 472 TDELPLYRVADHVIQHSGLKAMYEAEKGENAQARVENLEELVTAARSFEMPEELEDMGEL 531

Query: 709 LRFLTQAMADAAQGLGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESS 768
             FL+ A  +A +G         + ++    VQ++T+H +KGLE+P+VF+  V       
Sbjct: 532 NAFLSHAALEAGEG---------QADAHTDAVQLMTLHSAKGLEFPMVFMAGV------E 576

Query: 769 EGKYYDAESATTWVDLTGNEEALAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLR 825
           EG +                  LA  + +RL E+ RL YV +TRA+   +I  A  R
Sbjct: 577 EGIF---------------PSKLALEEGDRLEEERRLCYVGMTRAMQKLYITYAESR 618