Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., ATP-dependent DNA helicase Rep (RefSeq) from Shewanella loihica PV-4

 Score = 66.6 bits (161), Expect = 6e-15
 Identities = 111/509 (21%), Positives = 198/509 (38%), Gaps = 112/509 (22%)

Query: 341 AKAKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSR 400
           A+    ++ L FDDL+   +  L + ++  + ER +      ++DE+QDT+  QY +   
Sbjct: 172 AQHMKAYNALDFDDLILLPTLLLRHKQE--VRERWQKRIQYLLVDEYQDTNTSQYELVKL 229

Query: 401 LYLDYPQCGLLMIGDPKQAIYAFRGADIFTYIK-ARNQVNAHYT-LGTNWRSSAAMVAAV 458
           L  +  +    ++GD  Q+IY++RGA     +   ++  N     L  N+RSS  ++ A 
Sbjct: 230 LVGE--RARFTVVGDDDQSIYSWRGAKPQNLVLLGKDFPNLKLIKLEQNYRSSQRILRAA 287

Query: 459 NQVFSSATHPF---IYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSK 515
           N + ++  H +   ++S+    +P+     A++                           
Sbjct: 288 NILIANNPHVYDKSLFSELAYGEPLRVLIAANEE-------------------------- 321

Query: 516 TDYYAQMAEACAAQ-IQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQ 574
                Q AE   A+ I+H                  + GD A+L R  +++R++  AL  
Sbjct: 322 -----QEAERVVAEMIRHKFVGKT------------QFGDYAILYRGNHQSRLLERALMT 364

Query: 575 QGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELDALNN 634
             I    LS   S F     +DI   L  V  P+D+      V      +  + L+ L N
Sbjct: 365 NRIP-YKLSGGTSFFGRAEIKDIMAYLRLVVNPDDDNAFLRVVNLPKRGIGPATLERLGN 423

Query: 635 DENEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQ--RHIAERWLAESEGE-----RWLTD 687
             NE  Q I+ F           + P   + L Q  + I +   A + GE     + L  
Sbjct: 424 YANE--QHISMFEAIFHSELNHHLPPAAMSALYQFGKFIVDTGEAATRGEPVEAVKQLIR 481

Query: 688 YLHISELLQQATREIDSDQGLLRFLTQAMADAAQGLGGS--DEQIQRLESERRL------ 739
           +++  + L + +    + +  ++ +++      + L G   DE +   E   RL      
Sbjct: 482 HINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLEGDELDEGMTLPEVVTRLTLRDMM 541

Query: 740 -----------VQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNE 788
                      VQ++T+H SKGLE+P VF+                           G E
Sbjct: 542 ERNSEDEAGDQVQLMTLHASKGLEFPYVFM--------------------------VGVE 575

Query: 789 EAL----AKADQERLAEDLRLLYVALTRA 813
           E +       D++ + E+ RL YV +TRA
Sbjct: 576 ERILPHQTSIDEDNVEEERRLAYVGITRA 604