Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1113 a.a., ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing from Dechlorosoma suillum PS

 Score = 71.2 bits (173), Expect = 4e-16
 Identities = 145/568 (25%), Positives = 223/568 (39%), Gaps = 100/568 (17%)

Query: 340 LAKAKSTHHWLSFDDLLTQLSAAL-DNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIF 398
           L K K     + F D   Q+   L D      L  R+   Y   ++DEFQDT+PLQ+ I 
Sbjct: 353 LEKHKQARRLIDFVDAEWQVLQLLQDEGHAAFLQARLDARYKHILLDEFQDTNPLQWQIL 412

Query: 399 SRLYLDYPQCG-------LLMIGDPKQAIYAFRGADIFTYIKARNQVNAHY-----TLGT 446
              +LD    G       L ++GDPKQ+IY FR A+   +  A + +  ++         
Sbjct: 413 -LAWLDAYTHGDGGEAPCLFLVGDPKQSIYRFRQAEPRLFATAADFLEHNFGARRLAQDA 471

Query: 447 NWRSSAAMVAAVNQVFSSATHPFIYSDDIPFQPVAASPG--------------ADKRHWS 492
             R++ ++V  VN +FS      +      F+P ++  G              A++   S
Sbjct: 472 TRRNARSVVEVVNALFS------VEPAFTGFRPQSSLAGQLPGRVELLPLVSLAEEEEQS 525

Query: 493 LEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASGAATFHRGEAIEA 552
               ++  LT    E  D  +       + A   AA++Q  +           R      
Sbjct: 526 AGAALRDPLTTPATEATDPRRD------EEAARLAARLQQFMATLRVKEGEGER--PARW 577

Query: 553 GDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERL 612
           GD+ +LVR   +      AL   GI  +  ++R  +  +  A+DI  L   +  P  +  
Sbjct: 578 GDVMLLVRKRTQLAAYERALKAAGIPYL-AASRGGLLQTLEARDIAALFEFLVLPSADLA 636

Query: 613 LRAAVASNLFALTASEL--DALNNDENEWEQLI-------AEFRQYRRL-----WSERG- 657
           L   + + LFA+   +L   A       WE+L+       A  R  R       W +   
Sbjct: 637 LAQVLRTPLFAVGDDDLLQLAAAGPGPWWERLMGLCNRGEARPRLARAFALLDGWLKAAD 696

Query: 658 VLP---MLRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQATREIDSDQG----LLR 710
           VLP   +L  V  Q  +  R+        W     ++  LLQ A   +D D G    L R
Sbjct: 697 VLPAHDLLDRVFHQGELLARYREAVPAALWPGVEANLLALLQLA---LDLDGGRYPSLPR 753

Query: 711 FLTQAM----ADAAQGLGGSDEQIQRLESE--RRLVQIVTIHKSKGLEYPLVFLPFVMSY 764
           F+ +      ADA +     DE I   +S   +  V+I+TIH +KGLE P+V+L   +  
Sbjct: 754 FIDELSRLRDADADE---APDEGIVEGDSNDGQGRVRILTIHAAKGLEAPIVWL---LDA 807

Query: 765 RESSEGKYYDAESATTWVDLTGNEEALA----KAD-----------QERLA--EDLRLLY 807
                G          W       E L+    KAD           + +LA  E+L LLY
Sbjct: 808 NAEGGGPADAWSLLVDWPPQAPRPEHLSLYGIKADRGAAREPLFEGEAKLAEREELNLLY 867

Query: 808 VALTRAVYGCFI--GIAPLRNGNSSQEP 833
           VA+TRA    F+  G AP +  +    P
Sbjct: 868 VAITRAKQ-VFVASGSAPKKGDSPENSP 894



 Score = 37.0 bits (84), Expect = 9e-06
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 10/64 (15%)

Query: 24 LIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDRIRR 83
          ++EA AG+GKT+ +A   +RL+L  G A            IL +TFT  A  E+ +R+  
Sbjct: 19 VVEACAGSGKTWLLASRIVRLLL-EGAAP---------GDILAITFTRKAAREIEERVMG 68

Query: 84 RLHD 87
           L D
Sbjct: 69 WLRD 72