Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score = 73.9 bits (180), Expect = 4e-17
 Identities = 123/529 (23%), Positives = 198/529 (37%), Gaps = 126/529 (23%)

Query: 325 KTPLLVHAIHHCRHWLAKAKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMI 384
           K+ + V A    R + A  K+ +  + FDDL+          E   + ++ +      ++
Sbjct: 161 KSEIEVLAAKAYRDYAATLKA-YQAVDFDDLILLPMQLFQ--EHPKIRDKWQNRLRYLLV 217

Query: 385 DEFQDTDPLQYSIFSRLYLDYPQCGLLMIGDPKQAIYAFRGADIFTYIKA-RNQVNAHYT 443
           DE+QDT+  QY +     L  P+     +GD  QAIY +RGAD+       R+  N    
Sbjct: 218 DEYQDTNACQYQLLK--LLTGPRAMFTAVGDDDQAIYGWRGADVENLRGLPRDYPNLKLI 275

Query: 444 -LGTNWRSSAAMVAAVNQVFSSATHPF---IYSDDIPFQPVAASPGADKRHWSLEGQVQP 499
            L  N+RS+A ++ A N V  +    F   ++SD    + +  S   D  H   E  V  
Sbjct: 276 MLEQNYRSTARILQAANNVIGNNEKLFEKKLWSDLGHGEAIRGSVCRDNEH-EAESVVMK 334

Query: 500 ALTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASGAATFHRGEAIEAGDLAVLV 559
            L        DK + ++ +                                   D A+L 
Sbjct: 335 LLA-------DKFEKRSKF----------------------------------SDYAILY 353

Query: 560 RTGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVAS 619
           R+ ++AR+    L    +  V +S   S F     +D+   L  +   +D+     AV +
Sbjct: 354 RSNHQARLFETHLRNNRVPYV-MSGGTSFFEKSEIKDVIAYLRLLANQDDDPAFIRAVTT 412

Query: 620 NLFALTASELDALNN--DENEWEQLIAEFRQ-YRRLWSERGVLPMLRAVLTQRHIAERWL 676
               +  + L+AL     E       A F + + +  S R + P+L+       + +R L
Sbjct: 413 PKRGVGGTTLEALGTYAGERHISLFAAAFEEGFAQRVSHRQLEPLLQFCEFINRVEQRAL 472

Query: 677 AESEGE------------RWLTDYLHISELLQQATREIDSDQGLLRFLTQAMADAAQGLG 724
            E  GE             WL D+        + TR  DS  G +R  +Q +A    G G
Sbjct: 473 REPAGEVLNDMLTAIGYEAWLYDH--------EETRAADSKWGNVREFSQWLA----GKG 520

Query: 725 GSDEQI----------------QRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESS 768
             DE+                 Q  +SE   VQ+ T+H +KGLEY  VF           
Sbjct: 521 EKDEKTLIDLTQTIALINMLDKQNEDSEFDAVQLSTLHAAKGLEYKNVF----------- 569

Query: 769 EGKYYDAESATTWVDLTGNEEAL----AKADQERLAEDLRLLYVALTRA 813
                          L G EE +    +  +   + E+ RL+YV +TRA
Sbjct: 570 ---------------LVGVEEGILPHSSSVESGTVEEERRLMYVGITRA 603



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 9/73 (12%)

Query: 19 LHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELR 78
          L G  L+ A AG+GKT  I      L+   G         ++   I  +TFT  A  E++
Sbjct: 21 LDGPLLVLAGAGSGKTRVITQKIAYLIQECG---------MNPANIAAITFTNKAAREMQ 71

Query: 79 DRIRRRLHDARLA 91
          +R+ + L     A
Sbjct: 72 ERVGQLLQGGSTA 84