Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., Probable ATP-dependent DNA helicase II UvrD2 from Mycobacterium tuberculosis H37Rv

 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 48/279 (17%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG 409
           L FDDLL   +AA++ND    + E  +  Y   ++DE+QD  PLQ  + S    D  +  
Sbjct: 202 LDFDDLLLHTAAAIEND--AAVAEEFQDRYRCFVVDEYQDVTPLQQRVLSAWLGD--RDD 257

Query: 410 LLMIGDPKQAIYAFRGAD--IFTYIKARNQVNAHYTLGTNWRSSAAMVAAVNQVFSSATH 467
           L ++GD  Q IY+F GA          R    A   L  ++RS+  +V+  N+V ++A  
Sbjct: 258 LTVVGDANQTIYSFTGASPRFLLDFSRRFPDAAVVRLERDYRSTPQVVSLANRVIAAAR- 316

Query: 468 PFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACA 527
                            G+  R   L GQ +P     + E  D+P          A   A
Sbjct: 317 -------------GRVAGSKLR---LSGQREPGPVPSFHEHSDEPAE--------AATVA 352

Query: 528 AQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDS 587
           A I  ++   ASG             ++A+L R   ++ +  +AL+Q GIA  Y      
Sbjct: 353 ASIARLI---ASGT---------PPSEVAILYRVNAQSEVYEEALTQAGIA--YQVRGGE 398

Query: 588 VFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTA 626
            F +   Q+I++ LLA+ Q   ER   AA++  + A+ A
Sbjct: 399 GFFN--RQEIKQALLAL-QRVSERDTDAALSDVVRAVLA 434



 Score = 38.5 bits (88), Expect = 2e-06
 Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 21 GARLIEASAGTGKTYTIAGLYLRLVL-GHGCAETRHAHPLSVDQILVVTFTEAATAELRD 79
          G   + A AGTGKT TI      LV  GH          ++  Q+L VTFT+ A  E+R 
Sbjct: 25 GPVCVLAGAGTGKTRTITHRIASLVASGH----------VAAGQVLAVTFTQRAAGEMRS 74

Query: 80 RIRRRLHDARLAFARGA 96
          R+R     AR     GA
Sbjct: 75 RLRALDAAARTGSGVGA 91