Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 771 a.a., Probable ATP-dependent DNA helicase II UvrD1 from Mycobacterium tuberculosis H37Rv

 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 126/523 (24%), Positives = 201/523 (38%), Gaps = 115/523 (21%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYL-----D 404
           L FDDL+ +  A L    Q  + +  R  +   ++DE+QDT+  QY +   L        
Sbjct: 205 LDFDDLIGETVAVLQAFPQ--IAQYYRRRFRHVLVDEYQDTNHAQYVLVRELVGRDSNDG 262

Query: 405 YPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNAHYT--LGTNWRSSAAMVAAVNQVF 462
            P   L ++GD  Q+IYAFRGA I              T  L  N+RS+  +++A N V 
Sbjct: 263 IPPGELCVVGDADQSIYAFRGATIRNIEDFERDYPDTRTILLEQNYRSTQNILSAANSV- 321

Query: 463 SSATHPFIYSDDIPFQPVAASPGA-DKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQ 521
                            +A + G  +KR W+  G  +  + Y      D    +  + A+
Sbjct: 322 -----------------IARNAGRREKRLWTDAGAGELIVGYV----ADNEHDEARFVAE 360

Query: 522 MAEACAAQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVY 581
             +A A                   G  I   D+AV  RT N +R + + L + GI    
Sbjct: 361 EIDALA------------------EGSEITYNDVAVFYRTNNSSRSLEEVLIRAGIPYKV 402

Query: 582 LSNRDSVFASDVAQDIERLLLAVWQPEDERLLR------------------AAVASN--- 620
           +         ++ +DI   L  +  P D   LR                  A  A N   
Sbjct: 403 VGGVRFYERKEI-RDIVAYLRVLDNPGDAVSLRRILNTPRRGIGDRAEACVAVYAENTGV 461

Query: 621 -----LFALTASELDALN-NDENEWEQLIAEFRQYR-RLWSERGVLPMLRAVLTQRHIAE 673
                L A    ++  LN   E      +  F + R RL  + G L  + AVL +R    
Sbjct: 462 GFGDALVAAAQGKVPMLNTRAEKAIAGFVEMFDELRGRLDDDLGEL--VEAVL-ERTGYR 518

Query: 674 RWLAESEGERWLTDYLHISELLQQATREIDSDQGLLRFL---------TQAMADAAQGLG 724
           R L  S   + L    +++EL+  A  E  +D+     L         T  +AD  + + 
Sbjct: 519 RELEASTDPQELARLDNLNELVSVA-HEFSTDRENAAALGPDDEDVPDTGVLADFLERVS 577

Query: 725 GSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVD- 783
              +  +  E    +V ++T+H +KGLE+P+VF+                    T W D 
Sbjct: 578 LVADADEIPEHGAGVVTLMTLHTAKGLEFPVVFV--------------------TGWEDG 617

Query: 784 LTGNEEALAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLRN 826
           +  +  AL    +  L+E+ RL YV +TRA    ++  A +R+
Sbjct: 618 MFPHMRALDNPTE--LSEERRLAYVGITRARQRLYVSRAIVRS 658



 Score = 37.0 bits (84), Expect = 6e-06
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 9/58 (15%)

Query: 24 LIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDRI 81
          LI A AG+GKT  +      L+   G         + V QIL +TFT  A AE+R+R+
Sbjct: 39 LIVAGAGSGKTAVLTRRIAYLMAARG---------VGVGQILAITFTNKAAAEMRERV 87