Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1181 a.a., exodeoxyribonuclease V subunit beta from Klebsiella michiganensis M5al

 Score =  998 bits (2579), Expect = 0.0
 Identities = 569/1193 (47%), Positives = 754/1193 (63%), Gaps = 33/1193 (2%)

Query: 9    AVTLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVT 68
            A +LD LR PL G RLIEASAGTGKT+TIA LYLRL+LG G  E+     +SV+++LVVT
Sbjct: 5    AESLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLG-GESAFPRQVSVEELLVVT 63

Query: 69   FTEAATAELRDRIRRRLHDARLAFARGASDDPLLRSLLAEFTDHNLAVSLLLSAERQMDE 128
            FTEAAT ELR RIR  +H+ R+A  R ++D+ L   LLAE  D   A   LL AERQMDE
Sbjct: 64   FTEAATEELRGRIRSNIHELRIACLRDSADNSLYAGLLAEIADKTQAAQTLLLAERQMDE 123

Query: 129  AAIFTIHGFCQRMLTQNAFESGSRFENEFVTDESRLKAQVVADYWRRQFYPLPISLASEV 188
            AA+FTIHGFCQRML+ NAFESG  FE + + DESRL+ Q  AD+WRR  YPLP  +A+ +
Sbjct: 124  AAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLPREIAAVI 183

Query: 189  RRLWPAPSALLAEIAGYLSGPPVKLTTPLMEGD-LAALQQAQIARICEIKQHWLVEREEI 247
               W  P  LL  I  +L G   +L +P    + LA   Q  I RI  +KQ WL +  E+
Sbjct: 184  HEAWKGPRDLLKSIDRWLQGEAPQLKSPPSADETLAERHQQIIERINALKQQWLAQVGEV 243

Query: 248  EPAV--TGSDLHKNSQNALLRRLPILDAWAQSETHDLHVPSELEEFTQSGLLAKSKK-GN 304
            E  +  +G D  K ++    + L  + AWA+ ET    +P  LE+F+Q+ LL ++K  G 
Sbjct: 244  EAVLENSGLDRRKFNRGNQGKWLEKVTAWAEEETLSYQLPDALEKFSQAFLLERTKADGA 303

Query: 305  PPQLALFERIEAFLAEPVSLKTPLLVHAIHHCRHWLAKAKSTHHWLSFDDLLTQLSAALD 364
            PP   LF  +EA LA P++L   ++  A+   R  +A+ K     L FDD+L++L  AL 
Sbjct: 304  PPVHPLFSAVEALLASPLTLTDLVIARAMVEIREAVAREKRRRGELGFDDMLSRLDDALR 363

Query: 365  NDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCGLLMIGDPKQAIYAFR 424
             +    L   IR  +PVAMIDEFQDTDP QY IF R++       LL+IGDPKQAIYAFR
Sbjct: 364  GESGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRRQADTALLLIGDPKQAIYAFR 423

Query: 425  GADIFTYIKARNQVNAHYTLGTNWRSSAAMVAAVNQVFSSATHPFIYSDDIPFQPVAASP 484
            GADIFTY+KAR  V AHYTL TNWRS+  MV +VN++FS + +PF++ + IPF PV ++ 
Sbjct: 424  GADIFTYMKARGDVTAHYTLDTNWRSAPGMVDSVNRLFSLSDNPFMFRE-IPFMPVKSAD 482

Query: 485  GADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASGAATF 544
                  ++++    PA+  W      +     DY   MA+ CAAQI+  L+A   G A  
Sbjct: 483  KNQGLRFTVDDAAIPAMNIWLMSG--EAVGAGDYQTFMAQLCAAQIRDWLSAGQQGKALL 540

Query: 545  HRGEAIE---AGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERLL 601
             RGE  E   A D+ VLVR   EA ++RDAL    I SVYLSNRDSVF +  AQ++  LL
Sbjct: 541  WRGEKAEPVRASDITVLVRNRQEASLIRDALQLLSIPSVYLSNRDSVFETPEAQELLWLL 600

Query: 602  LAVWQPEDERLLRAAVASNLFALTASELDALNNDENEWEQLIAEFRQYRRLWSERGVLPM 661
             AV  PE E  LR+A+A+++F L A +++ LN+DE  W++L+ EF +YR+LW +RGV+PM
Sbjct: 601  QAVLAPERENTLRSALATSMFGLNALDIENLNHDERAWDELVEEFSRYRQLWRQRGVMPM 660

Query: 662  LRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQATREIDSDQGLLRFLTQAMADAAQ 721
            LRA+++ R IAE  LA + GER LTD LHISELLQ+A  +++S+  L+R+L Q +A+   
Sbjct: 661  LRALMSARRIAENLLATNGGERRLTDILHISELLQEAANQLESEHALVRWLAQHIAEPD- 719

Query: 722  GLGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTW 781
                +  Q  RLES++ LVQIVTIHKSKGLEYPLV+LPF+  +R+  +  Y+D  S    
Sbjct: 720  --SNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRSSFAAV 777

Query: 782  VDLTGNEEALAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTS-AHRSA 840
            +DL  +E ++A A+ ERLAEDLRLLYVALTRAV+ C +G+APL    S +   S  H SA
Sbjct: 778  LDLGQDEGSMALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSTRRSDKPGASDFHHSA 837

Query: 841  MGFLLQDGQEGGIADLQQALLKQCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQ 900
            +G LLQDG+    A L   L   C    D+    P    +  +Q PQ     L+AR L +
Sbjct: 838  LGRLLQDGEAMDAAGLMARLQAFCSG--DIALQLPDMAAQTPWQAPQAALPPLSARMLER 895

Query: 901  AIDRRWRVTSYSGLVMQSSHARHDPLQELPLLEVGGFDLDSAQERDGAALESVERSIFNF 960
            ++   WRVTSYSGL      A  D L  L        D+D+A    G  +E  + +   F
Sbjct: 896  SVTDDWRVTSYSGLQQNGHSAAQDLLPRL--------DVDAAGV--GEVVEEPQLTPHQF 945

Query: 961  PRGARPGTFLHSLFEEVDFQQSAHSEPNTKIILELMESEQIESEWLPVLQQLVDTVLSTP 1020
            PRGA PGTFLHSLFE++DF Q   ++     +   ++    E +W PVL   +D VL TP
Sbjct: 946  PRGASPGTFLHSLFEDLDFTQPVPAD----WMAGKLQLSGFEEKWTPVLTAWLDGVLRTP 1001

Query: 1021 LDGKALRLQQIMAAQRLTELEFLLPIE-VLDAPTLNRITQRHDPLSAHAGDLGFHAVQGM 1079
            L G  + L Q+ A  +  E+ F LPIE  LD   L+ + +++DPLS     L F  V+GM
Sbjct: 1002 LPGAEIALNQLSARDKQVEMAFYLPIEQPLDPLRLDALIRQYDPLSVDTPTLDFRQVRGM 1061

Query: 1080 LKGFIDLVFQYQGRYYVLDWKSNHLGDDPAAYHPQRLGSAMAEHRYDLQYQIYALALHRF 1139
            LKGFIDLVF++ GRYY+LD+KSN LG++  AY  + +  AM  HRYDLQYQ+Y+LALHR+
Sbjct: 1062 LKGFIDLVFRHNGRYYLLDYKSNWLGENREAYTQEAMRQAMRSHRYDLQYQLYSLALHRY 1121

Query: 1140 LRSRLAHYNYEQHFGGVFYLFLRGMDGR-GDQGVFHTKPSLALLDELDGLIAG 1191
            LR R+A Y+YE+HFGGV YLFLRGMDG+ G QG+F T+P+L L+D LD L AG
Sbjct: 1122 LRHRIADYDYERHFGGVIYLFLRGMDGQDGGQGIFTTRPALPLIDGLDALFAG 1174