Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., DNA helicase Rep from Klebsiella michiganensis M5al

 Score = 66.6 bits (161), Expect = 6e-15
 Identities = 112/503 (22%), Positives = 187/503 (37%), Gaps = 119/503 (23%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG 409
           L FDDL+   +  L  +E+  + ER +      ++DE+QDT+  QY +   L     +  
Sbjct: 181 LDFDDLILLPTLLLQRNEE--VRERWQNKIRYLLVDEYQDTNTSQYELVKLLV--GQRAR 236

Query: 410 LLMIGDPKQAIYAFRGADIFTYIKARNQVNAHYT--LGTNWRSSAAMVAAVNQVFSSATH 467
             ++GD  Q+IY++RGA     +       A     L  N+RSS  ++ A N + ++  H
Sbjct: 237 FTVVGDDDQSIYSWRGARPQNLVLLSQDFPALQVIKLEQNYRSSGRILKAANILIANNPH 296

Query: 468 PFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACA 527
            F                 +KR +S  G                      Y  ++    A
Sbjct: 297 VF-----------------EKRLFSELG----------------------YGVELKVLSA 317

Query: 528 AQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDS 587
               H     A      H        D A+L R  +++R+    L Q  I    +S   S
Sbjct: 318 NNEDHEAERVAGELIAHHFINKTAYKDYAILYRGNHQSRVFEKMLMQNRI-PYKISGGTS 376

Query: 588 VFASDVAQDIERLLLAVWQPED--------------------ERLLRAAVASNLFALTAS 627
            F+    +D+   L  +  P+D                    ++L   A+  N    TAS
Sbjct: 377 FFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGSATLQKLGEWAMGRNKSMFTAS 436

Query: 628 -ELDALNNDENEWEQLIAEFRQYRR---LWSERGVLPMLRAVLTQRHIAERWL------- 676
            ++           + +  F  + R     SER  +  +R ++      E WL       
Sbjct: 437 FDMGLTQTLNGRGYESLTRFTHWLREIQQLSEREPIAAVRDLIRGVDY-ESWLYETSPSP 495

Query: 677 --AESEGERWLTDYLHISELLQQATREIDSDQGLLRFLTQAMADAAQGLGGSDEQIQRLE 734
             AE   +   T +  ++E+L+ +  +ID    L + +T+         G SDE+  +  
Sbjct: 496 KAAEMRMKNVNTLFTWMTEMLEGS--DIDEPMTLTQVVTRFTLRDMMERGESDEETDQ-- 551

Query: 735 SERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNEEAL--- 791
                VQ++T+H SKGLE+P V+                          L G EE L   
Sbjct: 552 -----VQLMTLHASKGLEFPYVY--------------------------LVGMEEGLLPH 580

Query: 792 -AKADQERLAEDLRLLYVALTRA 813
            +  D++ + E+ RL YV +TRA
Sbjct: 581 QSSIDEDNVDEERRLAYVGITRA 603



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 21 GARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDR 80
          G  L+ A AG+GKT  I      L+ G G  + RH        I  VTFT  A  E+++R
Sbjct: 16 GPCLVLAGAGSGKTRVITNKIAHLIRGCG-YQARH--------IAAVTFTNKAAREMKER 66

Query: 81 IRRRL 85
          + + L
Sbjct: 67 VGQTL 71