Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., ATP-dependent DNA helicase, UvrD/REP family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 50.1 bits (118), Expect = 7e-10
 Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 8/146 (5%)

Query: 328 LLVHA--IHHCRHWLAKAKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMID 385
           LLVHA  +       A+ ++ H  L +DDLL ++   L   E+  L   +R  Y   M+D
Sbjct: 167 LLVHADGVSRIGEAYAEYRAEHGLLDYDDLLFEVERLLR--ERPDLLAHLRDRYRYIMVD 224

Query: 386 EFQDTDPLQYSIFSRLYLDYPQCGLLMIGDPKQAIYAFRGADIFTYIKARN--QVNAHYT 443
           E+QDT+ +Q  +   L  +     ++ +GD  Q+IYAFRGA++   +             
Sbjct: 225 EYQDTNLVQARLVQLLAGEGGN--VMAVGDDAQSIYAFRGANVQNILSFPQFFPGTRIIK 282

Query: 444 LGTNWRSSAAMVAAVNQVFSSATHPF 469
           L  N+RS+  ++   N + + A   +
Sbjct: 283 LEENYRSTQPVLDLTNAILAEAPQAY 308



 Score = 31.2 bits (69), Expect = 3e-04
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 21/80 (26%)

Query: 734 ESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNEEALAK 793
           E +R  V + TIH +KGLE+  V +  ++  R  S                     A+ +
Sbjct: 526 EEDRDSVVLSTIHSAKGLEWSAVIILDLVEDRFPS-------------------RHAVTR 566

Query: 794 ADQERLAEDLRLLYVALTRA 813
           AD     E+ RL+YVA TRA
Sbjct: 567 ADD--FEEERRLMYVACTRA 584



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 10/67 (14%)

Query: 19 LHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELR 78
          L G  L+ A AG+GKT T+      L+             +    IL++TFT  A  E+ 
Sbjct: 19 LDGPVLVIAGAGSGKTRTVVYRLANLL----------ERGVPASSILLLTFTRKAANEML 68

Query: 79 DRIRRRL 85
           R  R L
Sbjct: 69 QRASRLL 75